Moraxella sp. K02: MOXK02_09160
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Entry
MOXK02_09160 CDS
T10725
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mork Moraxella sp. K02
Brite
Enzymes [BR:
mork01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MOXK02_09160 (hrpA)
Messenger RNA biogenesis [BR:
mork03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MOXK02_09160 (hrpA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BFM99357
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Position
1030737..1035032
Genome browser
AA seq
1431 aa
AA seq
DB search
MKELISTAVPLNDPQLDKPQTDKHHGVKLPVMAKDSYYLSRLAQQLKQIKDKESEDYTSR
FDRYQKQLKHSQDRVQSRIASLPTIHLNEDLPVSQQADRLIKAIQDHQVIIVAGETGSGK
TTQLPKIAMLAGRGLTGQIGHTQPRRLAARSVANRIAEELGETLGQTVSFKVRFTEQGSS
DSIVKLMTDGILLAEMAHDKFLSRYDTIIIDEAHERSLNIDFIMGYLKRLLPKRPDLKVI
ITSATLDTARFSQYFSSVDSKTKQATPAPVFVVEGRSYPVEVRYRPLTEEIVTGSDDDSF
DDVEENLPRAITAAVEECYQDAASKGHADQADILIFAATEAQIHDLADILNQYAPRHTQI
LPLFARQSFAEQQQIFHPTGGRRIIIATNVAETALTVPNIRYVIDLGFARMSRYDYRSRV
QRLPIEAISQAAANQRKGRCGRIAAGVCIRLYSEEDFTSRPEFTEPEILRTNLASVILQM
ANLGLGEVENFDFIQPPDNRLVNDGRKLLEELGAIATKKPENSLSTSNDNSKGQSKRHPN
QLTKVGQMMAKMPIDPRLARMLIAGEQYGCLKELLVIVSGLSVQDPRERPSDKQTQADQK
HALFRQADSDFLFYLSLWQAIHGALFKSGGFKSSEFKNSDLDRQKNATLDDEAAPIAQSP
YGNDKLTNSQRKSFAKKHFLSSPRLREWQQTHSQLLQMVDGLKLIINQEPASYVPIHRAL
LTGLLSFIAQKVNEVDKGGKLIKAKRGEYVTARQHKAKIFPASTLFKQNPLWVMAFEVVE
TSQVFMRTAAKIEPEWILAMAGDLLKYHYFEPHWSAKTGHVKAYAQISLFGLIVVHKQLM
NYERVNLSESREIFLRDALVLGNLNAPSTGDGKKGKLPPFLQHNIDKVADVSLIEDKLRR
RDLLVDEEQLYEFYAKRVPEHIASRKVFEDWRKEVEKTEPQFLFFSDKDVLNEQAPATQA
FPETWQLGNLKLPLSYIFDPTSDDDGVTIKVPLVALPQVDAVELLWGIAGWRYELVLQLL
KTLPKDIRRQIVPVPDTAKQIFDTLEKNHHGGLLKQLCQALNQRGVRGANNQFVEPKDFN
PNEVETYLQPQIALVDDKNRLIEKGRDIDALKLRHQVTTSQAVASGKGVHSEFPEHFNFM
QNRHSAGVMIKQFSALVADGQPSYSDKKAVSIQQFTDVSVALNKHRQGLLALIGNELGAK
ARQLTSQIDKNFKLAFAPLGELDRLKDLLIHATLDATFEKFVAEFDHEKFTAGIHDKELV
IAINQLPLTLDEFNQAKAVVLTNFLSVGQSVLVQLKSVYEQWQQVRQKLLLLDRDIFEES
IEDIEDQLDDLSLSDFVYRMSYQDWQQYPRYLQALLVRLDRLEHNLDADLDAVYQLDKHM
ERLSIKGNDETIMPYRWLVEEFRIQLFAQPMKTRVPVSDKRLEKLWDELNG
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacttatatcgactgctgtaccattaaatgatcctcaactagacaagcctcaa
acagacaagcaccatggtgtgaaattaccggtcatggcaaaagacagctattatctgtca
cgccttgcccaacaattaaaacaaatcaaagacaaagaaagcgaagactatacgtcaaga
tttgaccgctaccaaaaacaactcaaacactcgcaagacagggtgcaaagccgtatcgcc
agtctgccaacgatacatctcaacgaagatttgcccgtcagccaacaagccgataggctt
atcaaagccatccaagaccaccaagtcatcatcgtggcaggggagacaggctcaggcaaa
accacccagttacctaagattgccatgcttgccgggcgagggctaacagggcaaatcgga
cacacacagccaagacgattagcggcgcgtagtgtggcaaatcgcattgctgaagaacta
ggggaaacgctcggacagacagtcagctttaaagtgcgttttactgagcaaggctcatcg
gattccattgtcaaactgatgaccgacggtattttgcttgctgaaatggcacatgacaag
tttttgagccgctatgataccattatcattgacgaagcccacgagcgcagtcttaacatt
gactttatcatgggttatctcaagcgtctattgccaaaacgtcccgatttaaaggtgatt
atcacatcggcaacgctcgacacagcaaggtttagccagtatttttctagcgttgatagt
aaaaccaaacaagcgacgcccgcgcctgtgtttgtggttgaaggtcgcagttatcccgtg
gaagtgcgctaccgtccgttgacggaggagattgtcacaggttcggatgatgacagcttt
gatgatgtcgaagaaaacttgccgcgagcgattaccgcagcggtggaagagtgctaccaa
gacgctgccagcaaagggcatgctgaccaagcggatattttgatttttgcggcaacagaa
gcgcaaattcatgatttggcagatattttaaaccaatatgccccccgtcatacccagatt
ttgccgttatttgcccgtcaaagttttgccgagcagcagcagatttttcacccgacaggc
ggccgtcgcattatcatcgccaccaacgttgccgaaaccgccttaaccgtgcccaatatc
cgctacgtcattgatttgggatttgctcggatgtcacgctatgactatcgctcgcgggta
caaagactgccgattgaagcgattagccaagctgccgccaatcaacgaaaaggtcgctgt
ggacgtatcgcggcaggcgtgtgtatccgtttatattcagaagaggactttaccagccgt
ccggaatttaccgagcctgaaattctgcgtaccaacttggcatcggtgattttgcaaatg
gcaaacttgggtctgggggaagtagaaaactttgactttatccagccacccgacaatcga
ctggtcaatgatgggcgtaaactattagaagaattgggggcgattgccactaaaaaacct
gaaaatagcctaagcacatctaatgacaatagcaaaggtcaatccaaacgccatcccaat
caactcaccaaagtcggtcaaatgatggcaaaaatgcccatagaccctcgtttggcacgt
atgctgattgcaggtgagcaatacggttgtctcaaagagctattggtgattgtatcgggc
ttgtcagtgcaagaccctcgagagcgcccgagtgataagcaaacccaagccgaccaaaaa
cacgcattatttcgccaagccgacagcgattttttattttatctcagtctttggcaggca
attcatggggctttatttaaaagcggtggatttaaaagtagtgaatttaaaaacagtgat
cttgaccgtcaaaaaaatgcaacgctagatgatgaagccgcgccaatcgcgcaaagccca
tatggaaacgacaaattaaccaacagccaacgcaaaagctttgccaaaaaacatttttta
agctcgccgcgtttacgtgaatggcaacaaacccatagccagttgctgcaaatggtggat
ggcttaaaattaataatcaaccaagagccagccagttatgtgcctattcaccgagcatta
ctcacaggtctgttgtcgttcattgcccaaaaagtcaatgaagtcgataaaggcggcaag
ctaatcaaagccaaacgcggcgagtatgtcaccgcgcgtcagcacaaagccaagattttt
cctgccagtaccttgtttaagcaaaatccgctatgggtaatggcgtttgaggtggttgag
acctcgcaggtatttatgcgtaccgctgccaaaatcgagccagagtggatattggcgatg
gccggggatttgctcaaataccattattttgagccgcattggtcagccaaaacggggcat
gtcaaggcatacgcccaaatcagcttgtttggtctgattgtggtacacaaacaactgatg
aattatgagcgggtcaaccttagcgagtctcgagaaatctttttgcgagatgccttggtg
ttgggcaatctgaatgccccgtccacaggcgatggtaaaaagggcaaattgccgccattt
ttgcagcataatatagataaagtcgctgatgtctcgttgattgaagacaagctgcggcgt
cgagacttgctggttgatgaagagcaattatacgaattttatgccaagcgagtgcctgag
catatcgctagtcgcaaagtttttgaagattggcgaaaagaggtagaaaagacggagcca
cagtttttattttttagtgataaagatgtgctcaacgaacaagcacccgccacccaagct
ttcccagaaacgtggcaactgggtaatttaaaactacccctgtcgtatatttttgacccg
accagcgacgatgatggcgtgaccattaaagtcccgcttgttgccttacctcaagttgat
gcggttgagttattatggggtattgcagggtggcgctatgagctggttttgcagctatta
aagacgttgcccaaagatattcgccgtcaaatcgtgcctgtgcccgataccgccaaacaa
atttttgacacgcttgaaaaaaaccaccatggcggactgctaaagcaactgtgccaagcc
ttaaaccagcgcggcgtgcgtggggcaaacaatcaatttgtagagccaaaagactttaac
ccaaatgaggttgaaacctatttgcagccacaaattgcgctggtcgatgacaaaaaccgc
ctgattgaaaaagggcgagatattgacgcattaaaactgcgtcatcaagtcaccacaagc
caagccgtcgccagtggtaaaggcgtacatagcgagtttcccgagcattttaactttatg
caaaaccgtcacagtgcaggcgtgatgatcaagcagttttcggcactggttgctgatgga
cagccaagctatagcgataaaaaggctgtgtctattcagcaatttactgacgtcagtgtg
gcactcaacaaacaccgtcaaggcttgcttgctctaatcggcaatgaattaggcgcgaaa
gccagacagcttaccagccaaattgataaaaactttaaacttgcctttgccccactcggt
gagcttgatagactcaaagatttgctgattcatgccacgcttgatgccacttttgaaaaa
tttgttgcagagtttgaccatgaaaaattcacggcagggattcatgataaagagttggtg
attgccatcaatcagttgcctttgacgttggatgaatttaaccaagccaaagccgtggtg
cttaccaatttcttgagcgttgggcaaagtgtattagttcagctaaaatcagtgtatgag
cagtggcagcaagttcgccaaaaactgctgttacttgaccgtgatatttttgaagaaagt
attgaagatatcgaagaccagctcgatgatttgagtttgtcggactttgtgtatcgcatg
agttatcaagattggcagcaatatccgcgttatctgcaggcgttgttggtgcgactcgat
aggcttgagcacaatttggatgccgatcttgatgccgtgtaccagctcgataagcacatg
gagaggctgtctattaagggtaatgatgagacaattatgccgtatcgttggttggttgag
gagtttcggattcagctgtttgcccagccgatgaaaacccgtgtgcctgtatcagataaa
cgcctagaaaaattgtgggatgagttgaatggttaa
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