Moraxella sp. K02: MOXK02_12840
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Entry
MOXK02_12840 CDS
T10725
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mork Moraxella sp. K02
Pathway
mork02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mork00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MOXK02_12840 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mork03021
]
MOXK02_12840 (rpoD)
Transcription machinery [BR:
mork03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MOXK02_12840 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TMPIT
Motif
Other DBs
NCBI-ProteinID:
BFM99725
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Position
1467643..1469547
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AA seq
634 aa
AA seq
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MSEHSTSQLATLIQLGKEQGYLTYAEINDQLPESVTESDQIDDIIQMLTDVGIKIFETAP
DEDDIMLSDDADDDEIAVDEAAAVLASVESEPGRTTDPVRMYMREMGTVDLLTREGEIAI
AKRIEDGIRDVQHAMTFWPGTVAMLINEYHQTFEGEKKVSDIITGFLDPEAADVIPLADD
EEVEIALPIIKPKVKDDEAEDELDDEAENADEIEEADGEVSEDADTEEASGLDPEEVRLR
FEELEQLFSKVKDLLATHDRDSDVVKAAMNELANCFMLFKLNSRVSDNIMDMMREVYEDV
RKNERHIMKLVIRRGKMPKDEFRKTFPHNETNLDWLPNRIAGKPAFADTLERVLDEVLQY
QGRIQQHEQNLGMSIDQMKVVARNMSVGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQ
FLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETI
NKINRVSRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLG
DFIEDSSISSPVDEATAQGLKEATREVLANLTEREAKVLKMRFGIDMSTDHTLEEVGKQF
DVTRERIRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacattcaacttctcaattagccacgctgattcaattaggtaaagagcaaggt
tatctcacctatgctgagattaatgaccaactccccgaatcggtaactgaaagtgaccaa
attgatgatattattcaaatgctcacagacgttggcatcaagatttttgagaccgcgcct
gatgaagacgacattatgcttagcgatgatgcggatgatgacgaaattgctgtcgatgaa
gccgccgcggtacttgcctcagtagaatctgagccaggtcgcaccaccgaccctgtgcgt
atgtatatgcgtgagatgggtacggttgacctactcacccgtgaaggcgagattgcgatt
gctaagcgtattgaagacggtatccgagatgtacaacatgccatgaccttttggccaggt
accgtggccatgctcattaatgaataccaccaaacctttgaaggtgaaaagaaagtctcg
gatattattaccggttttcttgaccctgaagccgctgatgtcatcccgcttgccgatgac
gaagaggtagaaatcgcgttaccgattatcaaacctaaagtcaaagacgacgaagccgag
gatgaactcgatgatgaagccgaaaacgccgatgaaatcgaagaagccgatggtgaagtc
agtgaagatgccgataccgaagaagccagcggtcttgaccctgaagaagtgcgtctgcgc
tttgaagaattagagcaattgttcagtaaggtcaaagatttattggccacccatgaccgt
gatagcgacgtggtcaaagcggcgatgaatgagcttgccaactgctttatgctatttaag
ctcaatagccgcgtctctgacaatatcatggatatgatgcgtgaagtgtatgaagacgtg
cgtaaaaacgaacgtcacatcatgaaactggtgattcgccgcggtaaaatgccaaaagat
gagtttcgcaaaacctttccgcataatgaaaccaaccttgactggctccctaaccgtatc
gcaggcaaacctgcctttgccgacacgttagagcgggtacttgacgaagtgttacagtat
caagggcgtatccagcagcatgagcaaaatcttggcatgagcatcgaccaaatgaaagtg
gtcgcacgtaacatgtctgtgggggaagccaaagcccgccgcgccaaaaaagaaatggtt
gaggcgaacttacgtctggttatctcgattgctaaaaaatacaccaaccgcggtttgcag
ttccttgatttgattcaagaaggtaacattggcttgatgaaagcggtagataaatttgaa
tatcgccgtggttataaattctccacttatgccacttggtggattcgccaagctatcacc
cgctcgattgctgaccaagcgcgtaccatccgtatccccgtgcacatgattgaaaccatc
aataaaatcaaccgtgtgtcgcgccagttattacaagaaatgggacgtgagcctacccct
gaggaattgggcgaacgcttagagatggacgaagtcaaagtccgtaaagtgctcaaaatc
gccaaagagcccatctcaatggaaaccccaatcggcgatgatgaagacagtcacttgggt
gattttattgaggattcgagcatctcaagcccagtggatgaagcaacagcacaagggtta
aaagaagctacccgtgaagtgttagccaacctcactgaacgtgaagccaaagtgcttaaa
atgcgttttggtattgatatgtctactgaccataccttagaagaagtgggtaaacaattt
gatgtcacccgtgagcgtattcgtcagattgaagccaaagcactgcgtaaactgcgccac
ccttctcgctcggaacatttacgttcattcctagagaatgattaa
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