Moraxella sp. K23: MOXK23_14610
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Entry
MOXK23_14610 CDS
T10744
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
morx Moraxella sp. K23
Pathway
morx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
morx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MOXK23_14610 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
morx03021
]
MOXK23_14610 (rpoC)
03400 DNA repair and recombination proteins [BR:
morx03400
]
MOXK23_14610 (rpoC)
Enzymes [BR:
morx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MOXK23_14610 (rpoC)
Transcription machinery [BR:
morx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MOXK23_14610 (rpoC)
DNA repair and recombination proteins [BR:
morx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MOXK23_14610 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
BFN02347
LinkDB
All DBs
Position
complement(1708574..1712806)
Genome browser
AA seq
1410 aa
AA seq
DB search
MKDLLDIMKSPADSGNQEFDSIQISLASPDTIKSWSHGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRRKFQGVICEKCGVEVTAAKVRRERMGHIELASPVAHIWFLK
SLPSRIGLLLDMTLRDIERVLYFESYVVTDPGLTTLEKYQLLDDEDYFKALEEFGDEFTA
KMGAEAVQDLLRDIDVDLEIDQLREEIPNTGSETKLKKMSKRLKLLESFRDSNNKPEWMV
MTVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRM
LQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFTYAKLLQNGIATTIKAAKKMVEREEPAVWDMLASVIRE
HPVLLNRAPTLHRLGLQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLTLEAQL
EARALMMSTNNILSPANGEPIITPSQDVVLGLYYISRSHINAKGENMTFSNVKEVYRALG
TGDLSVNAKIKVRIEETTYDEEGNANSVTKMVDTVAGRCLIWNITPKGMSFDEVNKEMTK
KNIARLINSCYRKMGVKDSVMFADQLMYLGFAQATLSGVSIGMEDMLIPPTKNKIIEAAD
AEVREIESQFEQGFVTAGERYNKVIDIWSRTNDQIAKAMMDNLSQDTVINSQGEAEKEKS
FNSIYIMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLSVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVAQDLVITQPDCGTDKGILMKPHIEGGEIIEQLADR
VLGRVTAKDVMSNKTGELAIPSGTLLDEHWVKVLDEHGIDEVWVRSVITCEVPHGVCSQC
YGRDLARGHRVNIGESVGVMAAQSIGEPGTQLTMRTFHVGGAASAAAVENSIQVNKGGTV
RFQNLKSVSHADGHLVVVSRSAEISITDELGRERERYKAPYGSSILVADGTEVTPGQTIG
KWDPHTHPIITEVSGTARFSEITDGLTATMKIDEATGMSSYEILATKDRPSSGKDLRPAI
ILDTKEGKEVVYFLPQQTIIRVREGDEVTTGSILGRVPQESSGTKDITGGLPRVADLFEA
RRPKDHAIMAEMSGTVSFGKDTKGKNRFIITNDDGEVHEELIPKWRQINVFEGERVERGE
VIADGPQNPHDILRLKGETELANYIVNEVQDVYRLQGVKINDKHIEVIIRQMLRKVEVTD
GGDSSYFKGDQAEYADIVAMNKKLDEENKFPVKFDRLLLGITKASLATESFISAASFQET
TRVLTAAAVTGKIDDLRGLKENVVVGRLVPSGTGLAYHAQRLESGKTTATEATENQQLEA
LDTLFAENMEPASMSFEDKFAEEFNSQDAK
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttattagacatcatgaaaagccctgccgactctggtaaccaagagttcgac
agcattcaaatttctcttgcctcacctgacaccatcaaatcttggtcgcatggggaagtt
aaaaagcctgaaaccatcaactatcgtactttcaaaccagaacgtgatggtcttttttgt
gccaaaatttttggacctgttaaagactacgaatgcttgtgtggtaaatacaaacgccgt
aaattccaaggcgtgatctgtgaaaaatgtggtgttgaagtgaccgccgccaaagtacgc
cgtgagcgtatgggtcatattgagctggcaagcccagttgcgcatatttggttcttaaaa
tcattaccaagccgtattggtctattacttgatatgactttgcgtgatatcgagcgcgta
ctgtattttgaaagctatgtcgtgactgacccaggtttaactacccttgaaaaatatcag
ttgctcgatgatgaagattacttcaaagcacttgaagagtttggtgatgaattcaccgcg
aaaatgggtgctgaagcggtgcaagacttgctgcgtgatattgatgtagatttggaaatc
gaccagttacgtgaagaaattcctaacacgggttcagaaaccaaactgaaaaaaatgtca
aaacgcctaaaattgcttgagtcattccgtgattcaaacaataagcctgaatggatggta
atgaccgtattacctgtattgccacccgatttgcgtccattggtaccgcttgaagggggg
cgttttgccacttcagacttaaatgatttatatcgccgcgtcattaaccgtaacaaccgt
ttaaaacgcttgttggagctcaatgcgcctgacatcatcgtacgtaatgaaaaacgtatg
ttacaagagtcagtggatgcgctgcttgacaacggtcgtcgcggtcgtgcgattacgggt
agcaacaaacgtcctttgaaatctttagctgacatgattaaaggtaaacaaggtcgtttc
cgtcaaaacttactgggtaaacgtgttgactattcaggtcgttcggtcattaccgtgggt
ccatacctgcgtctacaccaatgtggtttgcctaaaaaaatggcacttgagctgttcaaa
ccctttacttatgccaaacttttgcaaaatggtattgcgactactatcaaagccgctaag
aaaatggttgagcgtgaggaaccggcagtgtgggatatgcttgccagcgtgattcgtgaa
cacccagtgctactaaaccgtgcaccgaccctccatcgtttgggcttacaagcatttgag
cctgtactgattgaaggtaaagcaattcagctacatccgctagtttgtagcgcgttcaac
gccgactttgatggtgaccaaatggcggtacacgtacccttaactttggaggcccagctt
gaagcccgtgccttgatgatgtcaaccaacaacatcttgtcacctgccaatggtgagcca
atcatcacgccatcacaagacgtggtattggggttgtattacatcagccgttcgcatatc
aatgccaaaggcgaaaacatgactttctcaaacgtgaaggaagtgtatcgcgccctaggt
accggtgatttaagcgtcaatgccaaaattaaagtacgcattgaagaaaccacgtatgat
gaagaaggcaatgccaatagcgttactaaaatggttgacaccgttgccggccgctgttta
atttggaatatcaccccaaaaggtatgagctttgacgaagtcaacaaagagatgaccaag
aaaaacatcgctcgccttatcaattcttgctaccgcaaaatgggcgtgaaagacagcgtc
atgtttgctgaccaattgatgtatttgggttttgcccaagcaacgttgtcaggcgtatcc
attggtatggaagatatgctcattccacctaccaaaaacaaaatcatcgaagcggcggat
gcggaagttcgtgagattgaaagccagtttgaacaaggtttcgtgaccgcgggtgaacgt
tataacaaagtcattgatatttggtcacgtaccaatgaccaaatcgccaaagcgatgatg
gataacctatcacaagataccgttatcaatagccaaggtgaagcggaaaaagaaaaatcg
tttaactcgatttatatcatgtcggattcaggtgcgcgtggtagtgcggcgcagattcgt
cagttggcaggtatgcgtggtctgatggcaaaaccagacggctcgattattgaaacccca
attaaagctaacttccgtgaaggcttaagcgttttacagtactttatctcgacgcacggt
gcccgtaaaggtctagcggatacggcactcaaaacagcaaactcaggttacttaacccgt
cgcttggttgacgttgcgcaagatttggttatcacccagcctgattgtggtaccgataaa
ggtatcttgatgaagccacacattgagggtggtgaaatcattgaacaattggctgaccgc
gtgctaggccgagtcaccgccaaagatgtgatgtcaaataaaacaggcgaactagccatc
ccatcaggtaccttgctggatgagcattgggtaaaagtacttgatgaacatggtattgac
gaagtttgggtacgttctgtgattacttgtgaagtgccacatggtgtctgttcacaatgt
tatggtcgtgacttagcacgtggtcaccgcgtcaatattggtgagtctgtgggtgttatg
gcggcgcaatcaatcggtgagccgggtacccagctaaccatgcgtaccttccacgtgggg
ggtgccgcgagcgccgcagccgtggaaaacagtattcaggttaataaaggcggtactgtt
cgcttccaaaacttgaaatctgtaagccatgccgatggtcatttggtagtggtctctcgc
tctgcagaaattagtattaccgatgaattgggccgtgagcgtgagcgctataaagcaccg
tatggttcgtcaattttagtggcggatggcaccgaagttaccccaggtcaaaccattggt
aaatgggacccccacacccatccaatcattaccgaggtatcaggtaccgcacgctttagc
gaaatcaccgatggtttaacagccaccatgaaaatcgatgaagcaacgggcatgagctca
tacgaaatcttggcaaccaaagaccgtccaagctcaggtaaagatttacgtcctgcgatt
atccttgataccaaagagggtaaagaagtggtgtatttcttaccacagcaaaccattatt
cgtgtgcgtgaaggcgatgaggtaacaacaggttcgattttaggtcgtgtaccacaagaa
tcatcaggtaccaaagatattaccggtggtctaccgcgtgttgctgacttatttgaagcg
cgtcgtccaaaagatcatgcgattatggcggaaatgagtggtacagtaagctttggtaaa
gacaccaaaggtaaaaaccgctttattattaccaatgatgatggcgaagtacatgaagag
ttgattccaaaatggcgtcaaatcaacgtgtttgagggtgaacgtgttgagcgtggcgag
gtgattgccgatggtccacaaaacccacacgatattttacgcttaaaaggtgaaactgag
cttgccaactacatcgtcaatgaagtacaagacgtttaccgcttacaaggggtaaaaatc
aacgacaagcatattgaagtgattattcgtcagatgctacgtaaagttgaagttaccgat
ggcggtgattcaagctacttcaaaggtgaccaagctgaatacgctgatatcgtcgccatg
aacaaaaaactcgacgaagaaaacaaattcccagtcaagtttgaccgtttattgctcggt
atcaccaaagcctcattggcaactgaaagctttatttctgcggcgtcattccaagagaca
acgcgcgtattgacggcggcagcagttactggcaagattgatgacttacgtggtctaaaa
gaaaacgtggttgtcggtcgcttggtaccatcaggtactggtttagcttaccatgcccag
cgtctagagagcggtaaaaccaccgctacagaagctactgaaaatcagcagctagaagca
ctagacaccttgtttgccgaaaacatggagcctgcgtcaatgtcatttgaagacaaattt
gctgaagagtttaatagccaagatgcaaaataa
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