Moraxella sp. K23: MOXK23_19780
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Entry
MOXK23_19780 CDS
T10744
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
morx Moraxella sp. K23
Pathway
morx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
morx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOXK23_19780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morx03019
]
MOXK23_19780
03400 DNA repair and recombination proteins [BR:
morx03400
]
MOXK23_19780
Enzymes [BR:
morx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MOXK23_19780
Messenger RNA biogenesis [BR:
morx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MOXK23_19780
DNA repair and recombination proteins [BR:
morx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MOXK23_19780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
DEAD
Helicase_C
AAA_19
UvrD_C
ResIII
UvrD_C_2
AAA_11
Viral_helicase1
AAA_16
HTH_5
hnRNP_Q_AcD
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
BFN02864
LinkDB
All DBs
Position
2301807..2307284
Genome browser
AA seq
1825 aa
AA seq
DB search
MTTDLEFIEPISQPPKEPNPIAGLGEYLQSNLSDYFESLTAVDDIQAILDQVKLKPDTIM
WLDLEIDPDTQKLLDGAVIANGLYWQFDKTLFNNNASQLFEIFQTAHYLGGHNLIEFDLP
RLVDFFSGIEQLNIADDTLADWQAKTWDTLILSCLLIPHQPTHALAKLYKANTAYNNPVL
DCIESRIIFQLCLTAWDNLSLDSQFLYHQLLPNLEQLSSKSYFYVDNDCIFDWDKITSEM
PEGNQYELIALLKQAYDTLKQQKITPKENTNPWQYLGLACFVNWLRYFAKPQARRPVWIS
KHPLYKVSFQQAESIFWQIHEPNEDWINSQCKAFFGFDKLRDGQMQIVKATLANQDIPLG
ILPTGGGKSLTFQLPALIFSKYQRQLTVVISPLKALIEDQVINLHTQLPNYESRIAYLTS
GQTPETQKSIITGVWQGDIDILYLSPERLRTHSIRQLLKNRPPAFWVLDEAHTLSQWGTD
FRPDFLRIADHIIACYSPDIAQKVKSSIEAIAKKPSKHDSQFDLLAEDTPKTVDEPARDY
DFIAPKVSLVTATASSRVKEDLDKELVNKLIALTDNKPLVQYGTPVESLKIWRENITPHF
EQVPKENRMTRIYQILRERHACYEQNHPEHPEQGIALVYLRNRKACEEYAKHFAEQNLKA
VAYHGKLDESQKKQILQQFKNNELDVVVCTNAFGMGIDKAGIHTVIHSGVPNNLESYVQE
IGRGARKSHEHAHAFMLWDNSDIENQFQQERNSRIPNTDTLKNCWEQIRPILSRQPSDQW
FAGNLLLPILGIDDDAEQLNTQIRVALLALERYGLLIEKEQQPAFITIKLLQSPTEEHNG
KLLKLYNQLQQINDNLPTQTSIYKITEKQPTRYHLPELAVALGYSVKQLLNLLRQLVKLG
FAQWEIVVNIRLNYTVRHLKSEFNKKKRMLDALKAFIASNFFQTHYQEMDSVDGFERFDS
RALDNWLVSHQYQFRTAKEIFPMLRALNIIATRHHSRQYFTVSSTAETKEQLGIEQLSDN
WHNWLTLAEQQLNQLAPLLDEYIFAKLDGKGKEVGENFSLDDIAEQFNLSPIIILHQLEQ
LQKLGIIELSRLDDDANAIFFIGANKTKKPYNAVAYRYLQQHYEDRCMRIHVLNHWLGSD
IDTKRSLMEDYFRKPLTDVIEQYIPKETDVTRPYLKDYKKLILPNHLSDIQKQIIEDKSR
ASMILAGPGSGKTTVVVHRVAHLLMIEEIKPEKILILAYNRLAVCELRDRLKALVGNNAN
GVTILTFHALARQITGLSEKDATNEQLVEICSRIAHLNEEKNDDKRRNNTRYQWLIEQAI
AQLKESPQYFQYIMVDEFQDIDEYQYELIGLLADLQEAETEEDTTDNQSSGNYEQRGYLM
VVGDDDQNLYAFRGASIKFIQQFEQNYHIDVSQKYYLLNNYRSADNIVNLANNFISQSLP
NEERLKDADNSIKPTHIHPDSPIRYGTFHQPKGIDMASWVAQDIQAKLAEFESLEHKPSI
AILAPQWRDFDAIQHYLEILGINSQRYNESEQLIPLNSFIGQALYQFLDNERLTIIDGQV
TTFLENWRQQQHLTALDKAWQAILGNVEDLADVTYEQVLQRLEITQYDSEKAVYLLSYHS
AKGMEFDHIYVIDQIGSYKQNHENSQDTVRPLYVALTRAKQSLTVLQHQQNNHQILADLL
AKQGNKLEIPKVSKPDHLCFHRFLQLEEIVLTPKALVIEEGRDFVTQVFVKDGWGKSNDV
FSRFIIKDWNKHKMTSGFYSPGNQLICQFSSNLTTKLGNMNIELVGFTTTRFYQRDMSWY
EKHQYHGIETSHYLIVPFVIFRYHI
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgatttagaatttatcgaacctatttcacaaccccctaaagaacctaatccc
attgcagggctaggtgaatacctacaatccaatctgagcgactattttgaaagcctaacc
gcagtagacgacatccaagcgattttagaccaagttaagttaaagccagatactatcatg
tggcttgacttagaaattgacccagatactcaaaaactgcttgacggagcagttatcgct
aatggtttatattggcaatttgataaaacgttgtttaataacaatgcaagccagcttttt
gagatttttcagacggctcactatttaggcgggcataatttaattgagtttgatttgcca
agattagtagacttttttagcggtattgagcagttgaatattgctgatgacacgttggct
gattggcaagccaaaacatgggatacgcttatccttagttgcctgttgattccacatcag
ccgacccatgcgttagccaaactctataaagccaataccgcttataacaatcctgtgctc
gactgtatcgaaagtcggataatatttcagctgtgtctaacagcatgggataatttatcc
ttggatagccagtttttataccatcaactattgcccaatcttgagcaattatccagtaaa
tcgtatttttatgtcgataatgactgtatctttgactgggataaaatcacgagcgaaatg
cccgaaggcaatcaatatgagcttattgccttgctaaagcaagcttatgatacactcaaa
cagcaaaaaatcacaccgaaagagaacaccaatccttggcaatatctgggtttagcgtgt
tttgttaactggcttcgctattttgccaaaccgcaagctcgccgtcctgtatggattagc
aaacaccctttgtataaagtcagctttcagcaggccgaatcaattttttggcaaattcat
gagcctaatgaagattggattaacagccaatgcaaagcgttttttggctttgataaattg
cgtgatggtcaaatgcaaattgtcaaagctacccttgccaatcaagatatcccactggga
attttaccaacaggaggcggaaagagtttaactttccaattacctgcattgatttttagt
aagtatcaacgccaacttacggttgttatttcaccgcttaaagccttaatcgaagatcaa
gtcattaatctacatacccaactgcccaactatgaaagtcgtatcgcttacctaacatca
ggacaaacccccgaaacgcaaaaaagcattatcacaggggtatggcaaggcgatattgac
atcctgtatttaagcccagaacgcttgcgaactcatagtattcgtcaattgcttaaaaat
cgcccgcctgcattttgggtactggatgaagctcataccttaagccaatggggcaccgat
tttcgccctgactttttgcgcattgctgaccatattatcgcttgttatagcccagatatc
gctcaaaaagtaaagtcaagcattgaagcaatagcgaaaaagcctagtaaacatgacagt
caatttgatttgctggcagaagatacgcccaaaaccgttgatgagcctgctagagattat
gatttcattgccccaaaagtcagcctagtgaccgctactgcatcgagccgtgtcaaagaa
gatttggataaagaattggtcaataaactgatagctttaaccgataataagcctttggtg
cagtatggtacacctgttgaaagcctaaaaatttggcgagagaatatcacgccacacttt
gaacaagtgccaaaagaaaaccgcatgacgagaatttatcaaatcttgcgtgaacgtcat
gcctgttatgaacaaaaccatcctgaacatccagagcaaggtattgcccttgtatacctg
agaaaccgcaaagcctgcgaagagtacgccaaacactttgccgaacaaaatctcaaagca
gttgcttatcatggcaaacttgatgaatcgcagaaaaagcaaatcttacaacagtttaaa
aataatgaattggacgtggttgtttgtaccaatgcttttggtatgggtattgataaagca
gggattcataccgtcatccatagtggtgtgccaaacaatcttgaatcctatgtgcaagaa
atcgggcgtggggcaagaaaatcccatgaacacgcccacgcttttatgctgtgggacaat
agcgacatcgaaaatcaattccaacaagaacgtaattctcgtatccccaataccgacacc
ttaaaaaactgttgggaacaaatcagaccaattctgagcagacagcctagtgaccaatgg
tttgcaggcaatttactgttgccgattttgggcattgacgatgatgcggagcagcttaat
acccaaattcgtgtagctctattggctttagagcgctatggcttgttgattgaaaaagaa
caacaacctgctttcattacgattaaactattgcaaagtcccacagaggagcataatggt
aaactgcttaaactgtacaatcaattacagcaaattaacgataacctaccgacccaaacc
agtatttataaaatcactgaaaaacagcccactcgttatcatctacccgagcttgcggta
gcgttaggctattcggtcaagcagttacttaacctacttcgtcaattggtcaaactggga
tttgctcaatgggaaatcgtggtcaatattcgcttaaactatacggtcagacatctaaaa
agtgagtttaataaaaaaaagcgtatgcttgatgccttaaaagcttttattgctagcaat
ttttttcaaacacattatcaagagatggatagtgtggatgggtttgagcgttttgatagc
agagccctagataattggcttgtgtctcatcagtatcagttccgcacggctaaagaaatt
ttcccaatgttgcgagcgctaaatatcattgctacacgccatcattcacgccagtatttt
actgtcagctcgaccgccgaaaccaaagagcaactagggattgagcaacttagtgataac
tggcacaattggctaactcttgctgaacagcaactgaatcagcttgccccattgctggat
gagtatatttttgccaaacttgatgggaaggggaaagaagtcggcgaaaatttctcgttg
gacgatattgccgagcagtttaacctttcaccaataattattttgcaccaacttgaacaa
cttcaaaaactgggcattattgagctatcacggcttgacgatgatgccaatgcgattttc
tttattggtgcgaataaaaccaaaaagccatataacgccgtcgcttatcgctacttacaa
caacattatgaagaccgttgtatgcggattcatgtgttaaatcattggctgggtagcgac
atagacactaaacgctcactgatggaagactactttagaaagccattaaccgacgtgatt
gagcaatatatccccaaagaaaccgatgtcactcgcccttacctcaaagattataaaaaa
ctgattttacccaaccatttaagtgatatacaaaaacaaatcattgaagataaaagccgt
gcatcgatgattttggcaggacctggttcaggaaaaaccacagtggttgtacatcgggtt
gcccatttgttgatgattgaagagattaagcctgagaaaattctgattttggcttataac
cgtttagcagtgtgtgaattacgagaccgcctaaaagctctagtaggaaataatgctaat
ggcgtgacgattttgactttccatgctttggctagacaaatcacaggactgtcagaaaaa
gatgccaccaatgaacaattggttgaaatttgttctcggattgctcatctaaatgaagaa
aaaaatgacgataaacgccggaacaatacccgctaccaatggctgattgagcaagcgatt
gcccagcttaaagaatccccccagtattttcagtacatcatggtcgatgaattccaagat
attgatgagtatcaatacgagttgattgggttattagctgacttgcaagaagcggaaacc
gaagaagataccactgacaatcaatcgtcaggcaactatgaacaacgtggttatctaatg
gttgtgggtgatgatgaccagaatttatatgcttttcgtggggcaagtatcaagtttatt
cagcagtttgaacaaaactatcatattgacgtttcacagaaatattatctgctcaataat
tatcgcagtgccgataatatcgtcaatcttgccaataactttatcagccagtcactaccc
aatgaagaacggttaaaagatgctgataatagcatcaagcctactcatattcacccagat
tcgccgattcgctatggcacatttcatcagccaaaaggtattgatatggcgagttgggtt
gctcaagatattcaagccaaactggctgaattcgaaagtttagagcataaacctagcatc
gccattttagccccacaatggcgagactttgatgcaatacagcattatctagaaatttta
ggcattaacagccaacgctataatgaaagcgagcagttaattccattaaatagctttatc
ggacaggctttgtaccagtttttggataatgaacgcctgacgataattgatggacaagtg
accacgtttttagaaaattggcgacaacaacaacatttaaccgctttagataaggcgtgg
caagctatcttaggtaatgtcgaagacttagctgatgttacctatgaacaagtattacaa
cggcttgaaataacccaatatgatagtgaaaaagcggtttacttgctcagttaccatagt
gctaagggcatggaatttgaccatatttatgtcattgaccaaataggtagctacaagcaa
aatcacgaaaatagtcaagatacggttagacctttatatgtggctctgacacgagctaag
caatcactcactgttttgcaacatcaacaaaataatcatcaaatattagctgatttgtta
gctaaacaaggtaataaacttgaaataccaaaggtgagtaaaccagaccatttatgtttt
caccgattcttacaactggaagaaattgtattgacaccaaaagccttggtaattgaagaa
gggcgagattttgtcactcaggtttttgttaaagatggctggggcaaatcaaatgatgta
tttagtcgatttattatcaaagactggaataagcataaaatgacatcgggtttctattca
ccaggtaatcagcttatttgccagttttcaagcaatttaaccactaagttaggcaatatg
aatattgaactagtaggttttactaccactcgcttctatcaacgagatatgagttggtat
gaaaagcatcagtatcatggtatagaaacttcccattatctgatagtaccgtttgtaatt
tttagatatcatatttaa
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