KEGG   Faucicola osloensis: AXE82_04415
Entry
AXE82_04415       CDS       T04294                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
mos  Faucicola osloensis
Pathway
mos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AXE82_04415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mos03019]
    AXE82_04415
   03009 Ribosome biogenesis [BR:mos03009]
    AXE82_04415
Enzymes [BR:mos01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     AXE82_04415
Messenger RNA biogenesis [BR:mos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AXE82_04415
Ribosome biogenesis [BR:mos03009]
 Prokaryotic type
  rRNA processing factors
   AXE82_04415
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 CHP02642
Other DBs
NCBI-ProteinID: AME01105
UniProt: A0A378Q834
LinkDB
Position
995442..999245
AA seq 1267 aa
MKRILINATHAEEIRVALCNGNHLYDFDLENRTREQKKANIYKGHVTRVEPSLEAVFVEY
GSQRQGFLPIREIAPEYLAGDPRSTNNIKQLIKEGDELIVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNARGGGISRQISGKLRDEMKQALSELRLPKGMSVIIRTAGIGKTTDELQH
DLDHLLNIWKGIQQQSQKFPSPRLLHQEAGVVTRALRDYLRDDITEIWIDNEYAYNEAAN
FIEAVMPQQANKLRKYTDYEPMFARFGIEKQIETAYQREVRLPSGGSIVIDQTEALVSID
INSSKATKGADVSETAFNTNLEAADEIARQLRLRDMGGLIVIDFIDMATDDHQKQVENRL
KEATKNDRARIQFAEISRFGLLEMSRQRLRPSLEEATGYLCPRCHGTGMIRDLRSLALSI
MRQIEQRALQERHGEIQAEVPTDIAAFLLNEKRETLVYLEQESGTRITILPHAHLESPEF
NITYNSDGFAPSSYERVAESQQQEYKDRGYDTSNWHTDDNEISRVAPTGNHNAWSSASNA
VNNTPNPATPSNKPQQTANNTTAAKAAAPKPVQPAATVPATSAVAWLSNLFAPTQQAQVT
PHFSGQDAASAIESLVNTGAQSLGVQGQINHAALTASIPAVTADTGETSANPYQEASQQP
SATAESSDKDAERRKRGNRKPKAKKPNRYQSETSEAEVSSQDTDSNKDQSNDTSKTAKTS
ELPKREPNSRRDSRGIKERRATLANEDSSAAVIDVTATDTAVAAVDGRKNNQSRAEKPKG
TRQRDPNSVQVQVFKTEQQQPMAAVETTHLSLDASKGEIAKPEVQPIASATTPEPTTPEQ
VIETPVNASSVIVSNDEVAELTKASTPSAPSAEPATAELAVTPSQGRAKNDPREVYKAYQ
AQFSPVASVETPSVTKISGTVSQFINQYLDNAAEKMATDSVVSCFIQAIDAFNHQAATTT
TPAKDNVVVAEQQRFGQYFRNYGYASLSAQNLDDYHTAILPASQFQCQAGKTDAALPIVT
KRAINDPRGAIIDTAVAQAPTDSNPSVAEPTPNQTDSVTGQVEAASTQSASPSQNHLSYQ
AGSVGAWIVARLGDKGHALIEQGKLVEAYLQAHNAPVANQPTEPVYATIIADDAIVNQGV
DSVPTADEPAIAFNTDSEGVEAMDIEDSAEAAAQKRKTTPVSYKNMIESVAEQMKPATVG
MLTLATPKAPKTRTRKAKASEKPAAKPKTRTSKKVENAVVVTKKSTTTAQTDVAPSHDES
VTPQHNQ
NT seq 3804 nt   +upstreamnt  +downstreamnt
atgaaacgcatcctcatcaatgctacccacgccgaagaaatccgtgttgccctgtgcaat
ggcaatcacttgtatgatttcgatttagaaaaccgtacccgcgagcaaaaaaaagccaat
atttataaaggtcatgtgacccgtgtcgagccatcgcttgaagcggtatttgtggaatac
ggttcgcaacgtcaaggttttttaccgattcgtgaaatcgccccagagtatctagcaggc
gaccctcgctctaccaataacatcaaacaactgattaaagaaggcgatgagctcatcgtg
caagtggaaaaagaagaacgcggtaataaaggcgcggcgttatctacttttatttcattg
gcgggtcgttatttggtattgatgcccaacaacgcgcgtggcggcggtatctctcgccaa
atctctggcaagctgcgcgatgagatgaagcaagcgctaagtgagctaagactacctaaa
ggcatgagcgttatcatccgtaccgcagggattggtaaaaccacggatgaattgcaacat
gaccttgaccatttattaaacatttggaaaggcatccaacaacaaagccaaaaattcccc
tcacctcgcctgttgcaccaagaagcgggcgtagtcacccgtgccttacgcgactacctg
cgtgatgatatcacagaaatttggatcgacaatgaatacgcttataatgaagcggcgaat
tttattgaagcggtgatgccgcagcaagcgaataaactgcgcaaatacacggactatgag
ccgatgtttgcccgttttgggattgaaaaacaaatcgaaaccgcctaccagcgtgaagta
cgtttgccaagcggcggttcgattgtgattgaccaaactgaagccctggtatcaatcgat
atcaactcatcaaaagctaccaaaggcgcggatgtctcagaaacggcgtttaataccaat
ttggaagcggcagatgaaatcgcccgccagttacgcctgcgtgatatgggtggtttgatt
gttattgactttattgacatggcaaccgatgaccaccaaaaacaagtggaaaatcgtctc
aaagaagccaccaaaaacgaccgcgcgcgtatccaattcgccgaaatttcacgttttgga
ctactggaaatgagtcgtcaacgcctgcgtccgtcacttgaagaagcgacaggttacctc
tgcccgcgttgtcacggtaccggtatgattcgtgacttgcgttcacttgctttatcaatc
atgcgtcaaatcgagcaacgggcgttacaagagcgtcatggcgaaatacaagctgaagtg
ccaaccgatatcgcggcatttttactcaacgaaaaacgtgagacgctggtgtatcttgag
caagaaagtggcacgcgcattactatcttgccgcatgcccatcttgaatcccccgagttt
aatatcacttataacagtgatgggtttgcgccatcgagctatgagcgtgtcgccgaaagc
caacaacaagaatataaagaccgtggctacgatactagcaattggcacaccgatgacaat
gaaatcagccgtgtagccccgacaggtaatcataatgcctggagcagtgctagcaacgcc
gtcaataacacgcctaaccctgcaacgccatccaacaaacctcagcaaactgccaacaat
acgactgccgccaaagctgccgcgccaaagcccgtgcagccggctgccactgtccctgcg
acttcagcagtcgcttggctatcgaacttgtttgcccctacccagcaagcccaagtcacc
ccacactttagcggtcaagatgccgcttcggcgattgaaagtctcgtcaataccggcgcg
caaagcttgggggtgcaaggtcaaatcaatcacgcggcactgacggcaagcatccctgcg
gtgacagctgacaccggtgaaactagtgccaatccttatcaagaagcgtctcaacaacct
tcagccacggctgaatcaagcgataaagatgccgagcgccgtaaacgtggtaaccgcaaa
ccaaaggctaaaaaaccaaaccgttatcaatctgaaacgagtgaggcggaagtttcatca
caggacactgacagcaataaagaccagtcaaacgatacctcaaaaacggccaaaactagt
gagctgccaaaacgcgagccgaatagtcgccgtgacagccgcggcatcaaagaacgtcgt
gctacactagcgaatgaggatagtagcgcagcagtcattgatgtgacagcgactgatacc
gctgttgccgctgtcgatggtagaaaaaacaaccaatccagagcagaaaaaccgaaaggc
accagacaacgcgaccccaacagtgtgcaagttcaagtatttaaaactgaacaacagcaa
cctatggctgcggttgaaacaacgcacctctccctagatgccagcaaaggggaaattgca
aagcctgaggtgcagccaatagcctcggctacgacacccgagcccacaacacccgaacag
gtaattgagacgccagttaacgctagcagcgttatagtgtcaaatgacgaggtagcagag
cttactaaagcatctacaccatctgcgccatcagctgaacctgccactgcagagctagca
gtgacaccgagccaaggtcgtgccaaaaatgacccacgcgaagtgtacaaggcttatcaa
gcgcaatttagcccagttgcctctgtagagaccccttcagtgacaaaaatttcaggtacg
gtgagtcagtttattaaccagtacttagataatgctgctgaaaaaatggcaactgacagc
gtggttagctgctttatccaagccatcgacgcttttaatcatcaagctgctaccaccact
accccagcaaaagataatgtcgtagtggctgaacaacagcgttttgggcagtattttaga
aattatggttatgccagtttatccgcgcaaaacttggatgattatcatacggccattttg
cccgccagtcagttccaatgccaagcaggcaaaactgacgctgcgctgccaatagtgact
aaacgcgccatcaatgatccacgcggcgccataattgataccgctgtcgctcaagcgccg
actgactcaaacccgtcagttgctgagcctacccccaatcaaactgacagtgtcaccggt
caagtagaagcagcctcaactcaatcagcctcacccagccaaaaccacctgtcatatcaa
gcaggtagcgtaggcgcatggattgtggcgcgcttgggcgataaaggtcatgcgttgatt
gagcaaggtaaattggtcgaagcttacttacaagcgcacaatgcgccagtcgctaaccaa
ccaaccgagccagtctatgcgacaataatagcggatgatgctatagtgaatcagggcgtt
gactcagtgccaacagctgatgaaccagcaatagcctttaatactgacagcgaaggtgtt
gaagcaatggacatagaagatagcgcagaagcagcggcgcaaaaacgtaaaaccacaccc
gtaagttataagaatatgattgaaagtgtggcagaacaaatgaaaccggcaaccgttggt
atgctgaccttggcaaccccaaaagcaccgaaaacccgtacgcgtaaagctaaggcgagc
gaaaaaccagcagccaaacccaaaacgcgtaccagtaaaaaggtggaaaatgccgttgtt
gtcactaaaaaatcgacgaccaccgcacaaactgacgtagcgccctctcacgatgagtcg
gtaacgccgcagcacaatcagtaa

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