Faucicola osloensis: AXE82_05150
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Entry
AXE82_05150 CDS
T04294
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mos
Faucicola osloensis
Pathway
mos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXE82_05150 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mos03021
]
AXE82_05150 (rho)
03019 Messenger RNA biogenesis [BR:
mos03019
]
AXE82_05150 (rho)
Transcription machinery [BR:
mos03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AXE82_05150 (rho)
Messenger RNA biogenesis [BR:
mos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXE82_05150 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
AME01224
UniProt:
A0A109WBM7
LinkDB
All DBs
Position
1183525..1184793
Genome browser
AA seq
422 aa
AA seq
DB search
MNLTELKKKSIAELLLISEQMGLENMARSRKQDIIFAILKTHARNGEAIYGDGVLEILPD
GFGFLRSSEGSYLAGPDDIYVSPSQIRRFNLKTGDSIAGTIRPPKDSERYFALLKVNEIN
FDTPDRSRHKLIFENLTPLFPTQQLRLELGNGTTEDLTGRIIDLIAPIGKGQRSIIVAPP
KAGKTVLLQSIAQSITKNNPECYLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKQDVVILLDSITRLARAYNTVLPSSGKVLTGGVDANALERPKRF
FGAARNVEEGGSLTIISTALIDTGSTMDKVIYEEFKGTGNQEITLERDIAEKRVFPAINI
KKSGTRREERLMDEAMLRKVWILRKLLHPMDELQATEFLLEKLKDSKTNDEFFEQMTRKD
KS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgactgaactcaaaaaaaaatcgattgctgaattgttgttgattagcgagcaa
atgggtctagaaaacatggcccgtagtcgcaaacaagatatcatttttgccattttaaaa
acccatgcccgaaacggtgaagctatctatggggatggcgtgcttgagattttgcccgat
ggctttggttttttacgatcgtcggaaggctcttatctagcaggtcccgatgatatctat
gtgagtccgagccaaattcgtcgtttcaatctcaagacgggtgactccatcgctggtacg
attcgcccacccaaggattctgagcgttattttgccctattaaaagtcaacgaaatcaac
tttgacaccccagatcgctctcgccacaaactgatttttgaaaacttaaccccacttttc
cccacccagcagcttcgcctagaactcggcaacggtaccacagaagacttaacgggtcgt
atcattgacttgattgccccgattggtaaaggtcaacgctcgattatcgtcgcgccacca
aaagcgggtaaaaccgtattgctacaatccatcgcgcaatccatcaccaaaaacaaccca
gaatgttatctcatcgtgctgctcattgacgagcgtcctgaagaagtgaccgaaatgcag
cgcacggtgcgtggtgaagtggtcgcatcgacctttgatgagccgccagcccgtcacgta
caagttgccgaaatggtgattgaaaaagccaaacgcttggttgagcacaaacaagacgtg
gtgattttacttgactccattacgcgtctagcccgcgcctataatacggttttgccttca
tctggcaaagtactaacgggtggtgttgatgccaatgctttagaacgcccaaaacgcttt
tttggtgccgcgcgtaatgtcgaagaaggcggtagcttgaccattatttcaaccgctttg
attgacacaggcagtaccatggataaggtaatttatgaggagtttaaggggacaggtaac
caagaaattacccttgagcgagacattgccgaaaaacgggtattccctgccatcaatatc
aaaaaatcgggcactcgccgtgaagagcgtttgatggatgaagcaatgctacgcaaagta
tggattctgcgcaaactgctacaccccatggatgaattacaagccactgagtttttgcta
gaaaaacttaaagactcaaaaaccaatgatgaattctttgagcaaatgacgcgtaaagat
aaatcttaa
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