Faucicola osloensis: AXE82_10430
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Entry
AXE82_10430 CDS
T04294
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
mos
Faucicola osloensis
Pathway
mos03030
DNA replication
mos03430
Mismatch repair
mos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXE82_10430
03430 Mismatch repair
AXE82_10430
03440 Homologous recombination
AXE82_10430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mos03032
]
AXE82_10430
03400 DNA repair and recombination proteins [BR:
mos03400
]
AXE82_10430
Enzymes [BR:
mos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXE82_10430
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
AXE82_10430
DNA replication proteins [BR:
mos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXE82_10430
RNase H
AXE82_10430
DNA repair and recombination proteins [BR:
mos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXE82_10430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
RVT_3
ATG29_N
Motif
Other DBs
NCBI-ProteinID:
AME02121
LinkDB
All DBs
Position
2355858..2357621
Genome browser
AA seq
587 aa
AA seq
DB search
MLFFLILRAVFFDCFAVLYGLLSMSNHALTPLVGRALAYTDGACRGNPGKGGFGAVVILP
TGEQIDICGGEAHTTNNRMELMGAIAALENSPKALPIQIWSDSSYVIKGISEWLAGWKKK
HWKNVKNVELWQRLDGLCEQRQIDWQWVKGHAGHDGNEYADKLANQGIDQLPKSFNKVIK
NPPNPTIDLDVKSDFSDKNPDFDDKKKDPPMNPMSTDNDLVPTHSALTRDFSDASFDDAQ
DLEFADSEMMGDIFLQALDGEPAPITIQTSTTQTSKTQISHTQNDDVSTQSSLGGQSTHL
PTSANPHFAVFTNPQGQFVPQDDNLIAQRPVFNGITSQPNPTFIPLLPIAKHKGTANRQL
VLDTETTGFEAQNGDRIIEVGIVEMINRRFTGEKLHVYINPKIEMGEEVIRVHGIHNVFL
NDMPVFEQVGEAIYDFLQGAELIAHNAGFDMSFLQAEFARLGLPDIHQTVTVTDSLAIAK
RMFAGQRNTLDALVKRLNVGKQDRTFHGALLDAEILAEVYLAMTGGQVALAIDDDVGGGV
GGATVHQRFSTTIKRFLASSDAEQAHLEWLNALKDNNPQLAENWASV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcttttttttcttatactgagggctgttttttttgattgttttgctgttttatatggg
ttgttatctatgtcaaatcatgccttaacgccccttgtgggtcgtgcccttgcttatact
gatggcgcctgccgtggcaatcctggtaaagggggctttggtgctgtggtgattttacct
acgggtgagcaaattgatatttgcgggggtgaggcgcataccaccaacaaccgcatggag
ctgatgggggcgattgccgcattggaaaacagcccaaaagcgttaccgattcaaatctgg
tcagactctagctatgtcatcaaaggtatcagcgaatggctggcagggtggaaaaagaaa
cattggaaaaatgtcaaaaatgtggaattatggcagcggcttgatgggctgtgcgagcag
cgacaaattgactggcaatgggttaaaggacacgccggtcatgatggcaacgaatatgcc
gataagcttgcaaaccaaggcatagaccaactacccaaaagctttaacaaagtaattaaa
aatccacccaatcctaccattgatttagatgttaaatcggattttagtgataaaaaccct
gattttgatgataaaaaaaaagacccgcccatgaacccaatgtcaaccgataacgaccta
gttcccactcactcagcgttaacccgcgattttagcgatgcgtcttttgatgacgcgcaa
gacctagagtttgccgacagtgagatgatgggggatatctttttgcaggcacttgacggt
gaacccgccccaatcactattcaaacaagcactacccaaacaagcaagactcaaataagc
catactcaaaatgacgatgtatcaactcaatcatcgttaggcggacagtcaactcacttg
ccaaccagtgctaacccacattttgcggtgttcaccaatccacaagggcaatttgtcccg
caagatgacaacttgattgctcagcgccccgtgtttaacggtattaccagccagcccaac
ccgacttttatacctttattacccatcgccaaacacaaagggactgccaatcgccagctg
gttctcgatactgagaccacagggtttgaagcgcaaaatggtgaccgtatcattgaggtc
ggtatcgttgagatgattaatcgacgttttaccggtgaaaaactgcatgtctatatcaac
ccaaaaattgagatgggtgaggaagtcattcgcgttcatggcattcacaatgtgttttta
aatgatatgcccgtgtttgagcaagtcggtgaagcgatttatgactttttgcaaggcgca
gaactcatcgcgcataatgcagggtttgacatgagctttttgcaagctgagtttgcgcga
cttggcttgcccgatatccaccaaaccgtcaccgtgacagacagccttgccatcgccaaa
cgtatgttcgcagggcagcgcaatacattggatgcgctggtgaaacgtctcaatgtcggt
aaacaagaccgtaccttccacggcgcgttactcgatgccgagattttagcagaagtgtat
ctggcgatgacaggcggacaggtagcattagccatcgatgatgatgtcggtggcggtgtc
ggcggcgcaactgtgcatcagcgttttagcacgactatcaagcgctttttggcaagtagt
gatgctgagcaggcgcatcttgaatggcttaacgccttaaaagataacaacccacagctg
gctgaaaactgggcgagtgtttaa
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