Mycobacterium ostraviense: LTS72_02415
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Entry
LTS72_02415 CDS
T07946
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mot
Mycobacterium ostraviense
Pathway
mot03420
Nucleotide excision repair
mot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LTS72_02415 (pcrA)
03430 Mismatch repair
LTS72_02415 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mot03400
]
LTS72_02415 (pcrA)
Enzymes [BR:
mot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LTS72_02415 (pcrA)
DNA repair and recombination proteins [BR:
mot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LTS72_02415 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LTS72_02415 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
CarD_TRCF_RID
DEAD
TetR_C_13
Motif
Other DBs
NCBI-ProteinID:
UGT92306
LinkDB
All DBs
Position
479062..481389
Genome browser
AA seq
775 aa
AA seq
DB search
MSVHATDAKSETDQLLDGLNPQQRQAVLHEGSPLLIVAGAGSGKTAVLTRRIAYLIAARG
VAVGQILAITFTNKAAAEMRERVVRLVSARARYMWVSTFHSTCVRILRNNASLIDGLNSN
FSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPHRALADLTGDSDDL
ARTVASVYAEYQRRLRAANALDFDDLIGETVAVLQTFPDIAQYYRRRFRHVLIDEYQDTN
HAQYVLVRELVGHGTQEGPDNQVPPAELCVVGDADQSIYAFRGATIRNIEDFERDYPDAA
TILLEQNYRSTQNILSAANSVIARNAGRREKRLWTDAGEGELIVGYVADNEHDEARFVAE
EIDALAERGEITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYERKEIRDIIAY
LRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYSESTGASFADALQAAAEGKVAMLNT
RAEKAIAGFVQMLDELRDRLDSSQGDLGELVEAVLERTGYRRELESSTDPQELARLDNLN
ELVSVAHEFSADQANTAALEPDNEDVPDTGVLAAFLERVSLIADSDEIPEHGAGVVTLMT
LHTAKGLEFPVVFVTGWEDGMFPHMRALDDPTELSEERRLAYVGITRARQRLYVSRAMVR
SSWGQPMLNPESRFLREIPQELIDWRRTAPKPSFSAPVSGAGRFGPLRAAPTRSAGASKR
PLLVLQPGDRVSHDKYGLGRVEEVSGVGESAMSLIDFGSSGRVKLMHNHAPVTKL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgcgaccgacgcgaagtccgaaacagatcagctgctcgacggcctcaac
ccgcaacagcgccaggcggtgctgcatgagggctcgccgctgctgatcgtcgcgggcgcg
ggttcgggtaagacggcggtgttgacccggcggatcgcatacctcatcgccgcgcgtggt
gtcgcggtcggtcagatcctggccatcaccttcaccaacaaggccgccgccgagatgcgg
gaacgggtagtgcgcctggtcagtgcccgggcccggtacatgtgggtgtccacgtttcac
tcgacctgcgtgcggatcctgcgcaacaacgcgtcgctgatcgacggcctcaactccaac
ttctccatctatgacgccgacgattcgcgtcggctgctgcagatgatcggccgcgacatg
ggcctggacatcaaacggtattcgccgcggctgttggcgaacgcgatctcgaacctgaag
aacgagctgattgacccccaccgggcgctggccgacctgacgggcgactcagatgacttg
gcacgtaccgtcgcatccgtctacgccgaataccagcgacggctacgggcggccaatgcg
ctggatttcgacgacctcatcggcgagaccgtcgcggtgttgcagaccttcccggacatc
gcccagtactaccggcgacggttccggcacgtcctgatcgacgagtaccaggacaccaac
cacgcgcaatacgtcttggtgcgcgaactggtcggccacggcacgcaagaaggccccgat
aaccaggtgccgcccgcggagctgtgcgtcgtcggcgacgccgaccagtcaatctatgcc
ttccgcggcgcgaccatccgcaacatcgaagacttcgagcgcgactaccccgacgcggca
acgattctgctggaacagaattaccgctccacacaaaacatcttgtcggcggccaactcc
gtgatcgcccgcaacgccgggcgccgggagaagcgactgtggaccgacgccggggaaggg
gagttgatcgtcggctacgtcgccgacaacgaacacgacgaggccaggttcgtcgccgaa
gagatcgacgcactcgccgagcgcggcgagatcacctacaacgacgtcgccgtcttctac
cgcaccaacaactcgtcgcgctcgttggaagaggtgttcatccgcgccggaatcccgtac
aaggtcgtcgggggcgtgcgcttttacgagcgcaaggagattcgcgacatcatcgcctac
ctgcgcgtgctggataatcccggcgacgcggtcagcatgcggcgcattctcaatacgccg
cgccgcggcatcggcgatcgcgccgaggcgtgcgtggcggtctattccgagagcaccggc
gccagcttcgccgacgcgctacaagccgcggccgagggcaaggtcgcgatgctcaacacc
cgcgcggagaaggcgatcgcgggctttgtgcagatgctcgacgagctgcgggaccgcctc
gactcgtctcaaggggacctcggtgagttggtcgaggcggtgctggaacgcaccggatac
cgtcgggagctggaatcgtccaccgacccccaggagctggcgcggctggacaacctcaac
gaactcgtcagcgtcgcacacgaattcagtgccgaccaggcgaataccgctgcgctagaa
ccggacaacgaagacgtgccggacaccggtgtgttggcggcgtttctggaacgggtatcg
ctgatcgccgactctgacgagatccccgagcacggtgccggtgtcgtcacgttgatgacg
ttgcataccgccaaggggctggagttcccggtggtgttcgtgaccggctgggaggacggg
atgttcccgcacatgcgggcgctggacgacccgaccgaactctccgaggagcggcggctg
gcctacgtcggcatcacgcgggcccggcaacggctttatgtcagccgggccatggtgcgg
tcgtcctggggacagccgatgctgaatccggaatcgcgcttcctgcgcgagatcccgcag
gagctcatcgattggcggcgcaccgcgccgaagccgtcgttcagtgcgccggtgagtgga
gccggccggttcggccccctgcgggcggcgcccacccgttctgccggggcgagcaagcgc
ccgctgctggtcttgcagcccggcgaccgcgtttcgcacgataagtacggcttgggccgg
gtcgaggaagtctccggcgtaggggagtccgcgatgtcgctgatcgacttcggcagttcg
gggcgggtcaagctgatgcacaaccacgccccggtgaccaagctgtag
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integrated database retrieval system
