Mycobacterium ostraviense: LTS72_03960
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Entry
LTS72_03960 CDS
T07946
Symbol
tnpB
Name
(GenBank) IS607 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
mot
Mycobacterium ostraviense
Brite
KEGG Orthology (KO) [BR:
mot00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LTS72_03960 (tnpB)
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Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
HTH_OrfB_IS605
FYVE
Cytochrom_B562
DUF7128
C1_1
Ig_Rha78A_N
ManC_GMP_beta-helix
Motif
Other DBs
NCBI-ProteinID:
UGT92564
LinkDB
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Position
807535..809013
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AA seq
492 aa
AA seq
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MVEVPSGWVLQAYQYALDPTSAQVAVLESHAGGARFGFNTMLAAVKANLDQRKAERSYGI
ADDQLTPVVSWSFQQLRNRWNQIKHQVAVRDDGSPWWQDNSKEVYANAVANLAEALSNWD
DSRTGEREGPKMGFPRFKRKGRSAKSFAFTTEAMRVEPSRHHVTLPVLGTIHTHESTRKL
GRRIESGTARILGATVRFERGRWLVSFTCAVRRQPATVLAGIATADAPVVGIDSGVKDLL
VIATPDGIEIARHTAPRELKRALRKLRALQRKAARQIGPWDTRSQRKQDPSRGWQKTQAE
IARTHARIANLRTDRIHKLTTSLAKTHQVIGGETLAVKNMMRRPKPKPDPDNRGAFLPNG
AAAKTGLNRGLADAGLGEMFRQLDYKTRCYGSHLVKADRWLPSSKMCSGCGVVKTKLHLA
ERGYHCQHCGLVIDRDRNAAINLARHAPKATAPSTGVVTGGADRKTQPSGTAGGNETGTV
SERGAHPKGRAA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
ttggttgaggttccctcggggtgggttttgcaggcttatcagtacgcgctggacccgacg
tcggcccaggtggcggtgctggagtcgcatgctggtggtgcgcggttcgggttcaacacg
atgctggccgcggtgaaagccaatctggaccagcgtaaggcggaacgctcttacgggatt
gctgatgatcagctgacgccggtggtgtcgtggtcgtttcagcagctacgcaaccgctgg
aaccaaatcaagcatcaggtagcggtacgcgacgatggctccccgtggtggcaggacaac
agtaaagaggtgtacgccaacgcggtagccaacctcgctgaggcgctgtctaactgggac
gattcacgcactggtgagcgtgaaggcccgaaaatgggcttcccgagattcaaacgcaaa
ggccgctcggccaagagtttcgctttcaccaccgaagccatgcgggtggagccgtcccgg
catcacgtcacgctgccggtgctgggcacgatccatacccacgagtccactcgcaagctc
ggtcgccggatcgagtcgggcacggcgcgaattctgggtgccacggtgcgcttcgagcgg
ggccggtggctggtgtcgttcacctgtgcagtgcgtcgccaaccagccacggtgttggcc
ggcatcgctacagcggatgcgcccgtggtgggcatcgactccggggttaaagacctgctg
gtgattgccacgcccgacgggatcgagatcgcccgtcacaccgcgccccgcgaactcaag
cgggcgttgcggaaactgcgggcgctgcaacgcaaagcggctcgccagatcggcccgtgg
gacaccaggtcccaacgtaaacaggacccatctcgcggctggcagaaaacccaggccgag
atcgcccgcacccatgcccgaatcgccaacctacgaaccgatcggattcataaactcacc
acgagcctggccaaaacccatcaggtgatcggtggggagacactggcggtcaagaacatg
atgcgccgcccgaaacccaaacccgaccccgacaatcgcggcgcgttcctgcccaacggc
gccgccgccaaaaccggactcaaccggggattggctgatgccggccttggggagatgttt
cgccaactcgactacaaaacacgctgctatggatcgcatctggtcaaagccgacagatgg
ttgcccagctcaaaaatgtgttccggctgtggtgtggtgaaaaccaaactgcacctggcc
gaacgggggtatcactgccagcactgcggccttgtgatcgaccgagaccgtaacgccgct
atcaatttggcgcgtcatgcgcccaaggctacggcgccgagtaccggcgtcgttaccggt
ggagccgaccgtaagacccagccttcgggcacggcgggtggcaatgaaaccggaaccgtt
tctgaacggggtgcccacccgaaaggacgggctgcctga
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