Mycobacterium ostraviense: LTS72_27390
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Entry
LTS72_27390 CDS
T07946
Symbol
tnpB
Name
(GenBank) IS607 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
mot
Mycobacterium ostraviense
Brite
KEGG Orthology (KO) [BR:
mot00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LTS72_27390 (tnpB)
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Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
HTH_OrfB_IS605
FYVE
Cytochrom_B562
Ig_Rha78A_N
DUF7128
C1_1
ManC_GMP_beta-helix
Motif
Other DBs
NCBI-ProteinID:
UGT91776
LinkDB
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Position
complement(5980077..5981699)
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AA seq
540 aa
AA seq
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MPGKPKGDGTPTLSARVELGADFEAHRAVVEAVSVLFTLYGTDPLTGELVEVPSGWVLQA
YQYALDPTSAQVAVLESHAGGARFAFNTMLAAVKANLDQRKAERSYGIADDQLTPVVSWS
FQQLRNRWNQIKHQIAVRDDGSPWWQDNSKEVYANAVANLAEALSNWDDSRTGERDGPKM
GFPRFKRKGRSAKSFTFTTEAMRVEPSRHHVTLPVLGTIHTHESTRKLGRRIESGTARIL
GATVRFERGRWLVSFTCAVRRQPATVLAGIATADAPVVGIDSGVKDLLVIATPDGIEIAR
HTAPRELKRALRKLRALQRKAARQIGPWDTRSQRKQDPSRGWQKTQAEIARTHARIANLR
TDRIHKLTTSLAKTHQVIGGETLAVKNMMRRPKPKPDPDNRGAFLPNGAAAKTGLNRGLA
DAGLGEMFRQLDYKTRWYGSHLVKADRWLPSSKMCSGCGVVKTKLHLAERGYHCQHCGLV
IDRDRNAAINLARHALKATAPSTGVVTGGADRKTQPSGTAGGNETGTVSERSAHPKGRAA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
ttgccgggcaagcccaaaggcgatggcacaccaacgttgtcggcgcgggtggagctcggc
gcggacttcgaagcccaccgggcggtggtggaggcggtgtcggtgctgttcacgctctac
ggcaccgatcccttaacaggtgagttggttgaggttccctcggggtgggttttgcaggct
tatcagtacgcgctggacccgacgtcggcccaggtggcggtgctggagtcgcatgctggt
ggtgcgcggttcgcgttcaacacgatgctggccgcggtgaaagccaatctggaccagcgt
aaggcggaacgctcttacgggattgctgatgatcagctgacgccggtggtgtcgtggtcg
tttcagcagctacgcaaccgctggaaccaaatcaagcatcagatagcggtacgcgacgat
ggctccccatggtggcaggacaacagtaaagaggtgtacgccaacgcggtagccaacctc
gctgaggcgctgtctaactgggacgattcacgcactggtgaacgtgacggcccgaaaatg
ggcttcccgagattcaaacgcaaaggccgctcggccaagagtttcactttcaccaccgaa
gccatgcgggtggagccgtcccggcatcacgtcacgctgccggtgctgggcacgatccat
acccacgagtccactcgcaagctcggtcgccggatcgagtcgggcacggcgcgaattctg
ggtgccacggtgcgcttcgagcggggccggtggctggtgtcgttcacctgtgcagtgcgt
cgccaaccagccacggtgttggccggcatcgctacagcggatgcgcccgtggtgggcatc
gactccggggttaaagacctgctggtgattgccacgcccgacgggatcgagatcgcccgt
cacaccgcgccccgcgaactcaagcgggcgttgcggaaactgcgggcgctgcaacgcaaa
gcggctcgccagatcggcccgtgggacaccaggtcccaacgtaaacaggacccatctcgc
ggctggcagaaaacccaggccgagatcgcccgcacccatgcccgaatcgccaacctacga
accgatcggattcataaactcaccacgagcctggccaaaacccatcaggtgatcggtggg
gagacactggcggtcaagaacatgatgcgccgcccgaaacccaaacccgaccccgacaat
cgcggcgcgttcctgcccaacggcgccgccgccaaaaccggactcaaccggggattggct
gatgccggccttggggagatgtttcgccaactcgactacaaaacacgctggtatggatcg
catctggtcaaagccgacagatggttgcccagctcaaaaatgtgttccggctgtggtgtg
gtgaaaaccaaactgcacctggccgaacgggggtatcactgccagcactgcggccttgtg
atcgaccgagaccgtaacgccgctatcaatttggcgcgtcatgcgctcaaggctacggcg
ccgagtaccggcgtcgttaccggtggagccgaccgtaagacccagccttcgggcacggcg
ggtggcaatgaaaccggaaccgtttctgaacggagtgcccacccgaaaggacgggctgcc
tga
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