Mycobacterium ostraviense: LTS72_27435
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Entry
LTS72_27435 CDS
T07946
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mot
Mycobacterium ostraviense
Brite
KEGG Orthology (KO) [BR:
mot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mot03032
]
LTS72_27435 (topA)
03400 DNA repair and recombination proteins [BR:
mot03400
]
LTS72_27435 (topA)
Enzymes [BR:
mot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LTS72_27435 (topA)
DNA replication proteins [BR:
mot03032
]
Prokaryotic type
DNA Topoisomerases
LTS72_27435 (topA)
DNA repair and recombination proteins [BR:
mot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LTS72_27435 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
UGT91782
LinkDB
All DBs
Position
5990686..5993490
Genome browser
AA seq
934 aa
AA seq
DB search
MAEPKTRGPRSSGSRSSSGNGSGRRLVIVESPTKARKLAGYLGPRYIVESSRGHIRDLPR
AAADVPAKYKSEPWARLGVNVDADFEPLYIISPEKKSTVSELKGLLKDVDELYLATDGDR
EGEAIAWHLLETLKPRIPVKRMVFHEITEPAILEAAANPRELDIDLVDAQETRRIMDRLY
GYEVSPVLWKKVAPKLSAGRVQSVATRIIVQRERDRMAFRSASYWDIVAMLDASVSDPKA
QPPTFAARLTTVDGRRVATGRDFDSLGQLRKGASSSAEVVVLDEGSATALATRLDGAQLT
VASVEEKPYTRRPYAPFMTSTLQQEAGRKLRFSAERTMSIAQRLYENGYITYMRTDSTTL
SESAINAARTQARQLYGEEYVAAAPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELD
GDEFRLYELIWQRTVASQMADARGTTLSLRIEGMAGQQQVVFAASGRTLTFPGFLKAYVE
TVDELVGGEADDAERRLPQLSPGQRLAAVELTPDGHATNPPPRYTEASLVKALEELGIGR
PSTYSSIIKTIQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDAI
AAGTERRTNWLNNFYFGGEHGVADSVARSGGLKKLVGINLEGIDAREVNSIKLFDDAEGR
PVYVRVGKNGPYLERMVTGDNGEPAPQRANLDDSLTPDELTLEVAEQLFATPQEGRVLGV
DPQTGHEIVAKDGRYGPYVTEVLPEPAAEPAKKGKKTAAKPRTGSLLRSMDLQTVTLEDA
LRLLSLPRVVGVDPESGEEITAQNGRYGPYLKRGKDSRSLATEDQIFTITLDEALKIYAQ
PKRPGRQSASAPPLRELGTDPASGNPMVIKDGRFGPYVTDGETNASLRKGDDVATITDER
AAELLADRRARGPVKRTAKKTARKAPARKAAKRP
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
ttggctgagccgaagactaggggccctcgaagctccggcagccgtagtagcagcggcaac
gggagcggccggcgacttgtcattgtcgagtcgcccaccaaggcgcgcaaattggccggc
tacctggggcccagatacatcgtcgagtcgtcgcgaggccacatccgcgacctgcctcgg
gcggccgccgacgtgcccgccaagtacaagtccgagccgtgggcccggctcggggtcaac
gtcgacgccgacttcgaaccgctctacatcatcagcccggagaagaaaagcaccgtcagc
gagctgaaaggcctgctcaaagacgtcgacgaactctatctggccaccgatggtgaccgt
gagggtgaagcgatcgcctggcatctgctggaaaccctgaagccgcgcataccggtcaag
cggatggtcttccacgagatcaccgagccggccatcctcgaggccgccgccaacccccgc
gagctggacatcgacctggtcgacgcgcaggaaacccggcgcatcatggatcggctctac
ggctacgaggtcagcccggtgctgtggaagaaggtcgcgcccaagctgtcggcgggccgg
gtgcagtcggtggcgacccgaatcatcgtccagcgcgagcgcgaccggatggcgttccgc
agcgcgtcgtattgggacatcgttgcgatgctggacgccagcgtgtccgacccgaaggcc
cagccgcccaccttcgccgcccgactgaccactgtggacggccgcagggtcgccaccggc
cgcgacttcgactcactgggtcagctgcgcaaaggcgcgtctagttcggcggaggtcgtc
gtcctcgatgaagggagcgccaccgcgctggccacgcgtctggacggcgcgcagctgacc
gtggcgtcggtggaggaaaagccctacacccgccggccgtacgcgccgttcatgacgtcg
acgctgcagcaggaggccgggcgcaagctgcgattctccgccgaacgcaccatgagcatc
gcgcagcggctctacgagaacggctacatcacctatatgcgtaccgactcgacgacgctg
tcggagtcggcgatcaacgccgcgcgtactcaggcgcgtcagctctacggcgaggagtac
gtggccgcggcaccgcgtcagtacacccgcaaggtgaagaacgcccaggaggcgcacgag
gccatccggccggctggtgagacgttcgccaccccggacgcggtccgccgcgaactcgac
ggtgacgaattccggctctacgagctgatctggcagcgcacggtggcctcgcagatggcc
gacgcgcgcggtaccacgctgagcctgcggatcgaaggcatggccggccagcagcaggtg
gtgttcgccgccagcggccgcaccctgaccttcccgggctttctcaaggcctacgtggag
accgtggacgaattggtcggcggcgaagccgacgacgccgagcggcggctgccgcagctg
agtccgggccagcggctggccgccgtcgagttgacgcccgacggtcacgccaccaatccg
cccccgcgctacaccgaggcctcactggtcaaggcgctcgaggagttgggtatcgggcgc
ccgtcgacgtattcgtcgatcatcaagaccatccaggaccgcggctacgtgcacaagaag
ggcagcgccctggtgccgtcctgggtggcgttcgccgtaaccggtttgctggagcagcat
ttcggccgcctggtcgactacgacttcaccgcggcgatggaagacgagctcgacgcgatc
gccgccggcaccgagcgacgcaccaactggctcaacaacttctacttcggcggcgagcac
ggcgtggctgattcggtggcccgctccggggggttgaagaaactcgtcggcatcaacctc
gaaggcatcgacgcgcgagaagtcaactccatcaagctgttcgacgacgccgaaggccgt
ccggtctacgttcgggtgggcaagaacgggccgtacctggagcgcatggtaaccggcgac
aacggtgagccggcaccgcagcgcgccaacctcgacgactcgctcacgcccgacgagctg
accctcgaggtggccgagcagcttttcgccaccccgcaagagggacgcgtgctgggtgtc
gacccgcagaccggccacgagatcgtcgccaaggacgggcgttacgggccgtacgtgacc
gaggttctcccggaaccggcggccgagccggccaagaagggcaagaagaccgccgccaag
ccccgcaccggctcgctgctgcgcagcatggatctgcagacggtcacgctcgaggatgcg
ctgaggctgctgtcgctgccccgggttgtgggcgtggatcccgagtcgggtgaggagatc
accgcgcagaacggacgttatgggccatacctgaagcgcggcaaggattctcgttcgttg
gcgaccgaagaccagatcttcaccatcaccctcgacgaagcgctcaagatctacgctcag
ccgaaacgccctgggcggcaaagcgcttcggctccgccgctgcgtgaactgggcaccgat
ccggcgtcgggcaatccgatggtgatcaaggacgggcggttcggtccctacgtcaccgac
ggtgagaccaacgccagcctgcgcaagggtgacgacgtcgcgacgatcaccgacgaacgc
gccgccgaactgctggccgaccgacgggcccgcggcccggtcaagcggaccgccaaaaag
accgcccgcaaggcgccggctaggaaggctgccaagcgtccttag
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