Methanogenium organophilum: OU421_01220
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Entry
OU421_01220 CDS
T08653
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mou
Methanogenium organophilum
Pathway
mou04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
OU421_01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mou03019
]
OU421_01220
03009 Ribosome biogenesis [BR:
mou03009
]
OU421_01220
04131 Membrane trafficking [BR:
mou04131
]
OU421_01220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mou04147
]
OU421_01220
Messenger RNA biogenesis [BR:
mou03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
OU421_01220
Ribosome biogenesis [BR:
mou03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
OU421_01220
Membrane trafficking [BR:
mou04131
]
SNARE
SNARE associated proteins
Others
OU421_01220
Autophagy
Aggrephagy
Other aggrephagy associated proteins
OU421_01220
Exosome [BR:
mou04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OU421_01220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
CDC48_2
AAA_16
AAA_2
TIP49
AAA_14
AAA_22
AAA_33
AAA_5
RNA_helicase
AAA_28
nSTAND3
NPHP3_N
Mg_chelatase
IstB_IS21
ABC_tran
AAA_7
Parvo_NS1
AAA_17
AAA_18
Sigma54_activat
DUF815
AAA_24
AAA_3
NB-ARC
Vps4_C
Zeta_toxin
PhoH
AAA_19
bpMoxR
ATPase
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WAI01522
UniProt:
A0A9X9S4V2
LinkDB
All DBs
Position
233055..235529
Genome browser
AA seq
824 aa
AA seq
DB search
MTSYSPIEVTVKEAAHEDAGRGIARISTDIMNTLGLRSGDVIEICGREKAAAIIWPGYPE
DRGRAIIRVDGNIRTNARIGIDEKVTIRKAEVNEAKKVVIQPTHPVRLSGFEQSFARMIA
GRPVVEGQQFRVALLGTTLTFVITKLSPKGVGIVTQNTEVELKEEPYSPKEGKKAQDLPD
IHYEDIGGLGRELDQVREMIELPLRHPEIFDRLGIEPPKGVLLYGPPGTGKTLIAKAVAN
EVDAHFITLSGPEIMSKYYGESEGKLREVFEEAQENAPTIIFIDEIDSIAPKRAETKGEV
EQRIVAQLLALMDGLKGRGEVIVIAATNLPDNIDPALRRGGRFDREIEIGIPDRKGRLEI
FQVHSRGVPLDLESVSLTTDEEHVTEGEGVTDEERRRKKFLEPYAAATHGFVGADIALLV
KEAAMHALRKTMEGIQMDKEIPLEILETLRVTEDDFKAALTNVEPSAMREVMVEIPEVTW
DDVGGLEDIKTELTEAVEWPLKYPEIFERLDTRPPSGILLFGPPGTGKTLLAKAVANESE
CNFISIKGPELLSKWVGESEKGIRDIFRKARQAAPSIIFFDEIDSLLPKRGSYEGSSHVT
EGVVSQILTELDGLEELNNVTILGATNRPDMLDDAMMRPGRFDRVVYVPPPDRESRRKIF
AVYLNDDESVLAGDVDIGALVDATEGYVGADIEALIREAKLGAMREFITAMAGKADHERS
DALANVRVTKKHFDTAMKKVKATLDREAIEKNERLAWGFLYNEEERSLLEKAGSVLTRAG
FGHQDNKAVQNARKALRESTFGKKKKDFPAIKEQTEGLEALLES
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgacatcatattcacctatagaagttaccgtaaaagaggccgcacatgaggatgcagga
cgtggcattgcccgtatcagtacagacataatgaacaccctcgggttgcgaagcggtgat
gtgattgaaatttgcggacgcgagaaggcagcagccatcatatggccgggatatcctgaa
gaccggggaagggcgattatccgcgtcgatggcaatatccggaccaacgcccggataggc
attgatgagaaggttaccatccggaaggccgaggtgaacgaggcaaagaaggtggtcatt
cagccgacacatccggttcgtctcagcggattcgaacagtcgtttgcccggatgattgca
gggcgcccggttgttgaagggcagcagttccgtgtcgctcttctgggcacaacgctcacc
tttgtcatcacaaaactctccccgaagggcgtgggcattgtcacccagaacacagaagta
gaacttaaagaagagccatacagcccaaaggaaggaaaaaaggcacaggatttgcctgat
atccactacgaggacatcggtggtctcgggcgggagctcgatcaggtccgtgagatgatt
gagcttccgcttcgtcaccctgagatctttgaccgtctgggaattgagccgcccaaggga
gtgctcctgtacggcccgccgggcaccggtaagacactgattgcaaaggcggttgcaaac
gaggtggatgcacacttcatcaccctctcaggcccggagatcatgagcaagtactacggg
gagtccgagggaaaactccgggaggtctttgaggaggcacaggagaatgcaccgaccatc
atcttcatcgatgaaatcgattccattgccccaaagcgcgcagagacaaagggtgaggta
gaacagcggatcgttgcccagctcctcgcactcatggacgggctgaagggacgcggcgag
gtcattgtgattgccgcgacaaacctgccggacaatattgaccctgcactcaggcgcgga
ggccggtttgaccgcgagattgagatcggaatccccgatagaaagggacgtctggagatc
tttcaggttcacagccggggtgttccccttgacctggagtcagtctccctgacgacggat
gaggaacatgtcacagaaggtgaaggtgtaacggatgaggaacgccgaaggaagaagttc
cttgagccctatgcggcagccacccacggatttgtcggtgcagacatcgcactgcttgtg
aaggaggccgccatgcatgcactgcgcaagacaatggaaggcatccagatggataaggaa
atcccgcttgagatcctcgaaacactgcgggtaactgaagacgactttaaggcagccctc
accaatgtcgaaccgtctgccatgcgtgaagtcatggtagaaattccggaggtcacatgg
gatgatgtgggcggccttgaggatatcaagaccgaactgactgaagcggtagaatggcca
ctgaagtacccggagatatttgaacgcctcgacacacgaccgccatccggcatcctcctc
ttcggtccgccgggcactggcaagacactgctcgccaaggcagtcgcaaatgagagtgaa
tgcaacttcatctccataaaaggcccagagctcctctcaaagtgggtcggtgaatcagaa
aagggaatacgtgacatcttccggaaggcacgccaggcagcgccatcaatcatcttcttc
gatgagattgattccctgctcccaaagcgcggcagctacgaaggttcgtcccatgttacc
gagggtgtggtcagccagatcctgaccgaacttgacggactcgaagagctcaacaacgtc
accatcctcggcgcgacaaaccgaccggatatgcttgacgacgcgatgatgcgccccgga
aggtttgaccgtgtcgtctatgtccccccgcccgacagggaatcacgcaggaagatcttt
gccgtgtacctcaacgatgatgaatcagtccttgcaggggatgttgacatcggggcattg
gtcgatgcaacagaagggtatgtcggtgcagatatcgaagcgctgatcagggaggcaaaa
ctcggtgcaatgcgggagttcattactgccatggcaggaaaggccgaccatgaacgcagc
gatgctctcgcgaatgtccgggtgacaaagaagcatttcgatacggcgatgaagaaagtc
aaggcaacccttgacagggaagctatcgaaaagaacgaacggcttgcatggggcttcctc
tacaatgaggaggaacgctctctccttgagaaggcaggatctgtcctcacccgggcaggg
ttcggccatcaggacaataaagctgtgcagaatgcccgaaaagcgctcagagaatcaaca
tttgggaagaagaaaaaggatttcccggcaataaaggaacaaacagagggccttgaggcc
cttctggaatcctga
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