Methanogenium organophilum: OU421_06595
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Entry
OU421_06595 CDS
T08653
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mou
Methanogenium organophilum
Pathway
mou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OU421_06595 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mou03019
]
OU421_06595 (recQ)
03400 DNA repair and recombination proteins [BR:
mou03400
]
OU421_06595 (recQ)
Enzymes [BR:
mou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OU421_06595 (recQ)
Messenger RNA biogenesis [BR:
mou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OU421_06595 (recQ)
DNA repair and recombination proteins [BR:
mou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OU421_06595 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
HTH_40
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HEM4
LRV
Motif
Other DBs
NCBI-ProteinID:
WAI02536
UniProt:
A0A9X9S6F3
LinkDB
All DBs
Position
complement(1317575..1319665)
Genome browser
AA seq
696 aa
AA seq
DB search
MPFSNATRVLRQYFGYDSLYPYQEEIIRALAEGEDVIGVIATGGGKSLCYQIPALLSEGT
AIVISPLIALMKDQVDTLRECGVSAACITSLQDYRERRETEAAIVHGEVRVLYVSPERAV
KKEFFSLLKKAHITLIAVDEAHCISQWGHEFRPEYRELSRLIREFSHAPVVALTATATPA
VQKDIIAQLHLRRPRRVTGSFYRKNLRYEVRSKKDTKGAILSYLRAHQGQAGIIYCLSRK
GVEDLTATLRRSGIRALPYHAGLTRQEREAAQEAFVRDRVQVIIATVAFGMGIDKPDVRF
VIHHDLPRSPEHYYQETGRAGRDGDPADCILFYSAGDLHRQAFFIRQESSAARQRSAYAK
LEEMAAYCEEQRCRQAMILQYFGEEPPAGGCGSCDICCSPRERFDGTDVTRMAVTCVQAL
EVPCGSNHLIDLLRGANTKKIRELGQKNTPGYGVGKAYSKDEWRSFIRELIRMGYLGRES
GAYPVLTVGEAGEELLAAGADTEEVYLTRTKAVKDDHREEPADPGFLRLKALRREIADRE
GIAPYMIFSDAAIREMVARRPTTDAEFLSIKGVGAAKLERFGPAFMATLRHEDSKADNSA
RETLRLYCSGCTITEIARERSLTPDICAAHLTEAIEGGEQVEIDDLVPPHRQASIREAAA
REGTRDIRRLKAVLGDRFSYTDIRLTCAADRQRDGK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccattctctaatgccacccgggttctgaggcaatacttcggatatgactccctgtac
ccataccaggaggagatcatccgtgccttggcagagggtgaggatgtcatcggggtgatc
gcaaccgggggcggaaaatctctttgttaccagataccggcattactctcggaagggaca
gcaatcgtcatctctccccttatcgcccttatgaaggatcaggtagacaccctccgggaa
tgcggtgtgtctgccgcatgtatcacatcattacaggactaccgcgaaagacgggagacg
gaagcggccattgtccacggggaggtgcgggtgctctatgtatctcccgaacgggcggta
aagaaggaattcttctctcttttgaagaaggcacacatcaccctcatcgctgtcgatgag
gcacactgcatctcacagtggggacacgaattccggccggaataccgcgaactctctcgt
ctcattcgcgagttttcccacgcaccggtagtggcgctgacggcgacggcgactcctgcc
gtgcaaaaagatatcatcgcacaactccatctccgccgcccgcgccgggtgaccgggagt
ttctaccggaaaaacctccggtatgaggtcagatcaaagaaggataccaaaggagcaatt
ctgtcctatctccgggcacaccagggacaggctgggattatctactgcctcagtcgcaaa
ggggtcgaagatctcaccgccaccctccgccgctccggcatccgggctctgccctaccac
gccggactcacccggcaggaacgggaggcggcacaggaggcatttgtccgtgaccgtgtg
caggtgatcattgccaccgtcgccttcggaatggggattgataaaccggacgtccggttt
gtgattcatcacgacctgccccgttcccctgagcattactaccaggagacgggaagggcg
ggacgggacggcgacccggcagactgcattctcttctattctgcaggtgacctccaccgg
caggcattttttatccggcaggaatcatctgccgcccggcagcgttcagcgtatgcaaaa
ctcgaggagatggctgcctactgtgaggagcagcgctgtcggcaggcgatgatcctacag
tacttcggagaagagccccctgccggcggatgcggctcctgtgacatatgttgttcaccg
cgggagcggttcgacggcacggatgtgacccgcatggcagtcacctgtgtgcaggccctc
gaggtaccctgcggttcaaatcatctcatcgacctgcttcgcggtgcaaataccaaaaag
atccgtgaactgggacaaaagaatacccccggatacggtgtagggaaggcatactcaaag
gacgaatggcgttcgttcatacgggaactcatacggatgggatatctcgggcgggaaagt
ggcgcgtatcccgtgctcaccgtaggagaggcaggagaggaactccttgccgccggagca
gataccgaagaggtctatttaacccgcacgaaagcggtaaaagacgaccatcgggaagag
cctgcagatcccgggttcctccggctgaaagcactccgacgggagatcgcagaccgcgaa
gggattgctccatatatgatcttctcggatgcggctatccgggagatggttgccagacgg
ccaacaacggatgcagaatttctttccatcaagggggtcggtgccgccaaactcgagcgg
ttcggcccggcctttatggcgacattgcggcacgaagatagcaaagcagacaactcagca
cgagagactctgcgcctctactgttccgggtgtacgataacagagattgcccgggagcgt
tccctcaccccggatatctgcgctgcccatctcacggaggcaattgagggcggagagcag
gtggagattgacgatcttgtgccaccgcaccgtcaggcatccatacgggaggctgcggca
cgggaggggacacgggacatccggcggctcaaggctgtcctcggtgatcggttctcctac
actgacatccgcctcacctgtgccgcggaccggcagagagacgggaagtga
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