Methanogenium organophilum: OU421_06870
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Entry
OU421_06870 CDS
T08653
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mou
Methanogenium organophilum
Pathway
mou03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mou00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OU421_06870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mou03000
]
OU421_06870
03021 Transcription machinery [BR:
mou03021
]
OU421_06870
Transcription factors [BR:
mou03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
OU421_06870
Transcription machinery [BR:
mou03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
OU421_06870
RNA polymerase III system
TFIIIB
OU421_06870
RNA polymerase I system
SL1/TIF-1B
OU421_06870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
WAI00160
UniProt:
A0A9X9T6X5
LinkDB
All DBs
Position
complement(1374326..1374883)
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AA seq
185 aa
AA seq
DB search
MDVEGLYDSLKIENIVASGRIAEALDIEYLSGVLDGCVLNKKKFPGAVYHMKTPEIALLL
FSSGKIVMTGISNKDEFQEGLSAIISQLQHHGIETLASPDVVISNMVCSYDSGDFINLNK
VVLTLSHESVEYEPEQFPGLVYRIDDPKVVALLFSSGKFILTGAKNLDDVKLSIDYLSDR
LRQIR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaaggtctatatgattcactgaaaattgaaaatatcgtcgcttccgggcgc
atcgcagaagcgttggatattgaatatctttccggtgtactggatgggtgcgtcctcaat
aagaaaaaattccccggggctgtgtatcacatgaaaacccctgaaattgcactcctgctc
ttctcatcggggaagatcgttatgaccggcatatcaaataaggatgaatttcaggaagga
ctttccgccattatcagccagttgcagcaccatggcattgagactcttgcatcgccggat
gtagtcatatcaaatatggtatgctcctatgacagcggggattttatcaatctcaataaa
gtggtgctcacactcagccatgaaagcgttgaatatgagccggaacagttcccaggactt
gtataccggatagatgatccaaaagtggtggcattactgttctcgtccggtaaattcatc
ctaacgggggcaaagaatctggatgatgtgaaattgtccattgattatctgagtgacaga
ctgcggcagattcgataa
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