Methanogenium organophilum: OU421_08270
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Entry
OU421_08270 CDS
T08653
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mou
Methanogenium organophilum
Pathway
mou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OU421_08270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mou03019
]
OU421_08270
03009 Ribosome biogenesis [BR:
mou03009
]
OU421_08270
Enzymes [BR:
mou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OU421_08270
Messenger RNA biogenesis [BR:
mou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OU421_08270
Ribosome biogenesis [BR:
mou03009
]
Prokaryotic type
rRNA helicases
OU421_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WAI00425
UniProt:
A0A9X9S3W5
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All DBs
Position
1656572..1658194
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AA seq
540 aa
AA seq
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MENFFRFSTFPISPEIIKAIEDMGFEEPTPIQVQAIPPILEGKDVTGQAQTGTGKTAAFG
IPALECVDLSSKQTQVIVLSPTRELAIQTAEEFNRLSRYLKKIHVLPVYGGQPIERQFRA
LKAGVQIVVGTPGRVLDHIDRGTLSLDTIKMVVLDEADQMLDMGFREDIEKILAETPDER
QTVLFSATMPKPIKEISRRFQNKPEFVRVQHRELTVPQIEQLYLEVRNREKIEVLSRILE
MYDPELSLVFCNTKRAVDELTTQLQTRGYFSEGLHGDMKQSQRDRVMAKFRKGAIDVLIA
TDVAARGIDVDDVDLVINFDVPQDVEYYVHRIGRTARAGRQGRSITFVGPKEIYKLRTIQ
KYAHIKISAIPLPTARDVERTRMRNLVEKIKEMADDGDNDKYVEIVEQIMVDGYTSLDIA
AALLKMKLDTGNDTDDEVVISADGSGHSGIVQLCINLGREDRIRPKDIVGAITGETGITG
KEIGAISIYDTYSHVEVPQEKAKQVVEGMAGKSIGGVKLVNGKAIGYDCPKGGKSRKTRY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacttttttcgcttctcgacatttcccatatcaccggaaataatcaaagcaata
gaagatatgggatttgaagagccaacaccgatacaggtgcaggcaatcccccccatactt
gaaggtaaagatgtgaccggccaggcacagaccggtaccggaaagaccgcagcattcggt
attccggcccttgaatgtgttgacctgtcctcgaaacagacacaggtaattgtgctctcc
ccgacccgtgaacttgcaatccagacggctgaagagtttaaccggctttcaagatacctg
aagaagattcatgtccttccggtttatggtggccagcctattgaacggcagttccgggcg
ctgaaggccggtgtgcagatcgtggtcggcactcccggacgtgtgctggatcatatcgac
cgtggaacgctctctcttgacacgattaagatggtggttctggatgaggctgaccagatg
ctggatatgggattcagggaggatattgaaaaaattcttgccgagactcccgatgaacgc
cagacagtgcttttctcagcaactatgccgaagccaatcaaggagatttcacgtcggttc
cagaataaaccggagtttgtacgtgtacagcaccgtgaactgaccgtcccccagattgag
cagttgtaccttgaagtccgcaaccgggagaaaattgaggttctttcccgtatccttgag
atgtatgatccagaactctcactggtattctgcaacaccaagcgtgcggttgatgaactg
acaacccagctgcagacacgcgggtacttctctgaagggctccacggcgatatgaaacag
tcacagcgtgaccgcgtgatggcaaagttccgcaagggggcaattgatgtccttattgca
accgatgttgcagcacgtggtattgatgtggacgatgtggatcttgttatcaactttgat
gttccgcaggatgtggaatattatgtgcaccgtatcggacgcacggcacgggcaggacga
caggggcgttccattacctttgtcggtccaaaggagatctacaaactccggacgatccag
aagtatgcccacatcaagatttccgccatcccgctcccaaccgccagagatgttgaacgg
acgcgtatgcgaaacctcgtggagaagatcaaggagatggcagacgatggtgacaacgac
aagtatgttgagatcgttgagcagatcatggtcgacggctacacttcgcttgatattgcc
gcagccctcttaaagatgaaactggataccggtaacgacactgatgatgaagtggtcatt
tcagcagacgggtcgggtcactccggcattgttcagctctgcatcaatctaggcagggaa
gaccgcatccggccgaaagacattgtcggggccatcaccggggaaaccggcattaccggt
aaagaaatcggtgctatcagcatctatgacacctactcccatgtggaggttccgcaggag
aaggcaaagcaggttgttgagggtatggcagggaagtccatcggcggtgtaaagcttgtc
aatgggaaagccattggctatgactgtccgaagggtggaaaatcccggaaaacccgatat
taa
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