Methanogenium organophilum: OU421_11680
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Entry
OU421_11680 CDS
T08653
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mou
Methanogenium organophilum
Pathway
mou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OU421_11680 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mou03400
]
OU421_11680 (uvrB)
DNA repair and recombination proteins [BR:
mou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OU421_11680 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OU421_11680 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
AAA_22
P-loop_SecA
UB2H
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WAI01064
UniProt:
A0A9X9S368
LinkDB
All DBs
Position
complement(2387108..2389042)
Genome browser
AA seq
644 aa
AA seq
DB search
MTGFNLKADFSPAGSQPKAIASLAAGISEGKRFQTLMGVTGSGKTFTVANVIAQAQKPTL
VLAHNKTLAAQLYNEFKDFFPDNRVEYFVSYYDFYQPESYIPQKDQYIEKDAQINPKIEQ
LRLAATASLLSHDDVIVVASVSAIYGLGNPENFEGLGFEVTQGGRINRNEIISRLIDIQY
ERNDIELQPGRFRVKGDTIDLIPGSGIDIIRIEFFGSEVERITEMDRITREPIRTLPYYF
VYPARHYVIPEEEKAEAIVEIKKELEETLPTLGLIEAHRLRQRTLYDIEMIEETGYCKGI
ENYSRFFDHRKVGEKPFCLLDYFPDDFLMVVDESHQTLPQVRGMYNGDYSRKKSLVDYGF
RLPSAFDNRPLKFNEFEEYLKSVIFVSATPGQYEKEHSGDVVEQIIRPTGLLDPEVTIRP
VKTQIPDVCEEIQKTIDAGDRVLITTLTKKLAEELTEFLAEKGIKTRYLHSEINTIERTE
ILRELRLGVFDVLVGINLLREGLDIPEVSFIGILDADKEGFLRDARSLIQTIGRAARNDH
SHVVLYADKITDSIKTAVEETNRRREMQQAYNREHDISPVTIRKPIREKEVEIQDTKHIP
RSELPNMIIQVETEMLEAAERLDFERAIVLREKLKKLNAEVREK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggtttaatctgaaagctgacttttccccggcgggttcacagccgaaagcgatc
gcgtccctcgcggcaggcatcagcgagggaaagcggttccagacgctgatgggcgtgacg
gggtcaggaaagaccttcacggtggcaaatgtcattgcacaggcacagaaaccgacgctg
gtacttgcccacaacaagacgcttgcggcgcagttgtacaacgagttcaaagactttttt
cctgacaaccgggttgaatattttgtttcctattatgatttctatcagccggaatcctac
atcccccagaaagaccagtatatcgaaaaggatgcgcagataaacccaaagatcgagcag
ttgcgcctggctgcaacggcgtccctgctgtcccatgatgatgtgattgtcgttgcgtca
gtctccgcaatatatggtctgggaaacccggaaaattttgaaggactgggatttgaagta
acacaggggggacgcataaaccggaacgagataatttcacgcctgattgacatccagtat
gaacgtaatgatattgagcttcagcccggacgattccgggtaaagggggacacgattgac
ctgatccccggttccgggattgatatcatccggattgaattcttcgggagtgaggttgag
agaataacggagatggaccggatcacccgcgagccaatccggacgctgccgtattatttc
gtgtatcccgcccggcactatgtcatcccggaagaggagaaggcagaggcgattgtcgag
atcaaaaaggaactcgaagagacccttcccacccttggtctcatcgaggcacaccgtctg
cgtcagcggacactttatgatatcgagatgatcgaagagacagggtactgcaagggaatt
gagaactattcccggttctttgatcaccgaaaggttggcgagaaaccgttctgccttctg
gactatttcccggacgacttcctgatggtcgtcgatgagagccaccagacgctcccgcag
gtcagggggatgtacaacggggactattcacggaagaaatcactggtggactatgggttc
cggctcccgtccgcgtttgacaaccgccccctgaaattcaatgagttcgaagaatacctg
aagtcggtgatattcgtctccgcaacacccggccagtatgaaaaggagcattcaggagat
gtcgtagagcagattatccggccgactgggcttctggacccggaggtcacaatacgtccg
gtgaaaacacagatccctgatgtgtgtgaggaaatccaaaagaccattgatgcaggtgac
cgggtactcatcacaacccttacgaagaaactcgccgaagaactgacagaattcctcgca
gaaaagggaatcaagacccgctacctccactcggagatcaacaccatcgaacggaccgag
atcctgcgtgaactccggctgggcgtgtttgatgtgctcgtcggcatcaacctcctgaga
gaagggcttgacattccggaggtgagtttcatcggcatactggacgcggacaaggaaggg
ttcctccgggacgcacgaagcctgattcagaccatcgggcgggcggcacgaaacgaccac
tctcatgttgtcctctacgcagacaaaatcacggattccatcaagacggcggtggaggaa
acaaaccgccgccgcgagatgcagcaggcgtataaccgggagcacgacatcagccctgtt
accatccggaaacccatccgggaaaaggaagtcgagattcaggacacgaaacacatcccc
cgctcagaactgccgaatatgatcattcaggtcgaaaccgagatgctggaggcagcggaa
cggctggactttgaacgggcgattgtgctgcgggagaagctgaagaagctaaatgcggag
gtgagagaaaaatga
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integrated database retrieval system
