Moraxella sp. DOX410: RNZ41_02085
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Entry
RNZ41_02085 CDS
T10479
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mow Moraxella sp. DOX410
Brite
KEGG Orthology (KO) [BR:
mow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mow03009
]
RNZ41_02085 (rlmD)
Enzymes [BR:
mow01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RNZ41_02085 (rlmD)
Ribosome biogenesis [BR:
mow03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RNZ41_02085 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
MTS
TRM5-TYW2_MTfase
Ubie_methyltran
Methyltr_RsmB-F
Methyltransf_23
CMAS
TRAM
Methyltransf_11
Cons_hypoth95
FtsJ
GCD14
Motif
Other DBs
NCBI-ProteinID:
WNP27895
UniProt:
A0AA96KZF1
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All DBs
Position
complement(468794..470305)
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AA seq
503 aa
AA seq
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MPNATADQTQSNQLTKNPSKKIKPTARVRKRLQDAPPVTLTVTNLAHDGRGVASYGDQPD
HHLDKHGKKVFVSFALPNETVSVKITGSRKSMEEGDAALVLANPNPERTTPPCPHFGVCG
GCSLQHWQPDGQIQFKQSVLAELLEHQAHIQPEHWLPPLVADRLGYRTKARMGVRYVEKK
GTALVGFRERASNFLANLNECHVLDPRVGFEIENLKALISSLDARDHIPQLELAMGETLE
DVIDSKKSIAVIVRHMVDLGEDDIAKLQAFFAERNWQLLLQPKGSDTVHRIDPLYENTAH
ARPSSLTVPPTGGLFYRLPEFDVTFEFSPLDFTQVNLSVNRKMTKLAIDLLALQPGERVL
DLFCGLGNFSLPLARQVGDTGFVIGVEGSSEMTQRAKMNATANGLHHTDFFAQDLTKDFS
SEPWVGQVDALLIDPPRSGALEVMQYLDKFNAKRIVYVSCNPITLARDTAVLLDKGYKLT
HAGVMDMFCHTGHVESIARFEKR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacgctaccgctgaccaaacccagtctaaccaactcaccaaaaacccaagcaaa
aaaatcaaacccaccgcgcgggtgcgtaaacgtttgcaagacgccccacccgttacccta
acagtgaccaaccttgctcatgatggacgtggcgtggcaagttacggtgaccagcccgac
catcacctcgataaacatggcaaaaaagtattcgttagctttgcgctgcccaacgagacc
gtgagcgtcaaaatcacaggctcacgtaaaagcatggaagaaggggacgcggctctcgta
ctggcaaacccaaaccctgaacgcacgaccccaccttgcccgcattttggggtgtgtggt
ggctgtagcttacagcactggcaacccgatgggcagattcaatttaaacaatcggtactg
gcagagctgctcgagcaccaagcccatatccagcctgaacactggcttcccccattggtt
gctgaccgtttgggctaccgcaccaaggcacggatgggcgtgcgctatgtcgagaaaaaa
ggcacggcgttggtcggttttcgtgagcgcgctagcaattttttggcaaatttaaatgaa
tgccatgtgcttgacccgcgtgtcggctttgaaattgagaacttaaaagcgctcatcagt
tcgcttgacgcccgtgaccatattccacagcttgagttagcgatgggtgaaacgcttgag
gatgttatcgatagcaaaaaatccattgccgttattgtccgtcacatggtggatttgggt
gaggatgatatcgcaaaactgcaagctttttttgccgagcgtaactggcagttattgtta
cagcccaaaggtagcgacacggtacatcgtattgacccattgtatgaaaatactgcccat
gcgcgcccatcaagcctgactgtgccaccgacgggcggtttgttttatagattacccgag
tttgatgtgacgtttgaattctcgccactggattttacccaagtcaatttgtcagtcaat
cgtaaaatgaccaagctggcaattgatttattagcgttgcagccaggcgagcgagtgctt
gatttgttttgcggcttgggcaattttagtctgccactggcgcgtcaagtgggtgatacg
ggctttgtgattggggtggaaggcagcagtgagatgacacagcgcgccaaaatgaatgcc
accgccaacggcttgcaccataccgacttttttgcccaagatttgaccaaagatttctcg
agtgagccttgggttgggcaagtcgatgcgctgctgattgacccaccccgctcaggcgct
ttagaagtgatgcagtatctggataaattcaatgccaaacgcatcgtctatgtgtcgtgc
aatccgataacgcttgcccgcgataccgccgtgctacttgacaaaggctacaagctcacc
catgcgggggtgatggatatgttctgtcacacagggcatgtggaaagcattgcaagattt
gagaaacgctaa
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