Moraxella sp. DOX410: RNZ41_02245
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Entry
RNZ41_02245 CDS
T10479
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mow Moraxella sp. DOX410
Pathway
mow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RNZ41_02245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mow03019
]
RNZ41_02245
03009 Ribosome biogenesis [BR:
mow03009
]
RNZ41_02245
Enzymes [BR:
mow01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
RNZ41_02245
Messenger RNA biogenesis [BR:
mow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RNZ41_02245
Ribosome biogenesis [BR:
mow03009
]
Prokaryotic type
rRNA processing factors
RNZ41_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF5610
Motif
Other DBs
NCBI-ProteinID:
WNP27926
LinkDB
All DBs
Position
complement(500755..504546)
Genome browser
AA seq
1263 aa
AA seq
DB search
MKRILINATHAEEIRVALCNGNHLYDFDLENRTREQKKANIYKGHVTRVEPSLEAVFVEY
GSQRQGFLPIREIAPEYLAGDPRSTTNIKQLIKEGDELIVQVEKEERGNKGAALSTLISL
AGRYLVLMPNNARGGGISRQISGKLRDEMKQALSDLRLPKGMSVIIRTAGIGKTTDELQQ
DLDHLLNIWKGIQQQSQKFPSPRLLHQEAGVVTRAVRDYLRDDITEIWVDNEYAYNEAAN
FIEAVMPQQANKLRKYTDYEPMFARFGIEKQIETAYQREVRLPSGGSIVIDQTEALVSID
INSSKATKGADVSETAFNTNLEAADEIARQLRLRDMGGLIVIDFIDMATDDHQKQVENRL
KEATKNDRARIQFAEISRFGLLEMSRQRLRPSLEEATGYLCPRCHGTGMIRDLRSLALSI
MRQIEQRALQERHGEIQAEVPTDIAAFLLNEKRETLVCLEQESGTRITILPHAHLESPEF
NITYNSDGFAPSSYERVAESQQQEYKDRGYDTSNWHTDDNEISRVAPTGNHSAWSNASNA
TNTTPSPATPSNKSQQTANNTTAAKAAAPQPVQPAATVPATSAVAWLSNLFAPTQQAQVT
PHFSGQDAASAIESLVNTGAQSLGVQGQINHAALTASIPAVSANTSETSANPYQEASQQP
SATAESSDKDAERRKRGNRKPKAKKPNRYQSETSEAEVSSQDTDSNKDKSNDASKTAKTS
ELPKREPNSRRDSRGVKERRPTLANEDSNAAVVNDVTATDTAVAPVDGRKNNQSRAEKPK
GTKQRDPNSVQVQVFKTEQQQPIAAVETTHLSLDDSKGEIAKPEAQPIASASMPEQAIQT
PVNPSNVTVSNDEVAELAKASTPSAPSAEPVTAQLAVTPSQGRAKNDPREVYKAYQAQFS
PVASVVSTSVTKISGTVSQFINQYLDNAAEKMASDSVVSCFIQAIDAFNHQAATTTTPAK
DNVVVAEQQRFGQYFRNYGYASLSAQNLDDYHTAILPANQFQRQAGKTDAALPAVTKRAI
NDPRGSLVNTAVTQAPTDSNPSVAEPISNETDSGKGQVEAASTQSASPNQNHLSYQAGTV
GAWIVARLGEQGHALIGQGKLVEAYLQAHNAPVANRPTEPVSVTTIADDATANQDVDLVP
TADESAVAFNTDSEGVEATDVEDSAEAAAQKRKTTPVSYKNMIESVAEQMKPATVGMLTL
ATPKAPKTRTRKAKASEKPAAKPKTRTSKKVENAVVVTKKSTTTPQTDVAPSHDESVTPQ
HNQ
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatcctcatcaatgctacccacgccgaagaaatccgtgttgccctgtgcaat
ggcaatcacttatatgatttcgatttagaaaaccgtacccgcgagcaaaaaaaagccaat
atttataaaggtcatgtgacccgtgtcgagccatcgcttgaagcggtatttgtggaatac
ggttcacaacgtcaaggttttttaccgattcgtgaaatcgccccagagtatctagcaggc
gaccctcgctctaccactaacatcaaacaactgattaaagaaggcgatgagctcatcgtg
caagtggaaaaagaagaacgcggtaataaaggcgcggcgttatctactttgatttcattg
gcgggtcgttatttggtattgatgcccaacaatgcgcgtggcggcggtatctctcgccaa
atctctggtaagttgcgcgatgagatgaagcaagcgttaagtgatctaagactacccaaa
ggcatgagcgttatcatccgtaccgcagggattggtaaaaccacggatgaattacaacaa
gaccttgaccatttattaaacatttggaaaggcatacaacaacaaagccaaaaatttccc
tcacctcgcctgttgcaccaagaagctggcgtagtcacccgtgccgtacgcgactacttg
cgtgatgatatcacggaaatttgggtcgacaatgaatacgcctataatgaagcggcgaat
tttattgaagcggtgatgccgcagcaagcgaataaactgcgcaaatacactgactatgag
ccgatgtttgcccgttttgggattgaaaaacaaatcgaaaccgcctaccaacgtgaagta
cgtttgccaagcggcggttcgattgtgattgaccaaactgaagccttggtatcgattgat
attaactcatcaaaagccaccaaaggcgcggatgtctcagaaacggcgtttaataccaat
ttggaagcagcagatgaaatcgctcgtcaattacgcctgcgtgatatgggtggtttgatt
gttattgacttcattgacatggcaactgatgaccaccaaaaacaagtggaaaatcgtctc
aaagaagccaccaaaaacgaccgcgcgcgtatccaattcgctgaaatttcacgttttgga
ctacttgaaatgagtcgtcaacgcttgcgtccgtcacttgaagaagcgacaggttacctc
tgtccccgttgtcacggtaccggtatgattcgtgacttgcgttcacttgccttatcaatc
atgcgtcaaatcgaacaacgggcgctacaagagcgtcatggcgaaatacaagccgaagtg
ccaaccgatatcgcggcatttttactcaacgaaaaacgtgaaacgctcgtttgtcttgag
caagaaagtggcacgcgcattactatcttgccgcatgcccatcttgaatcccccgagttt
aatatcacttataacagtgacgggtttgcgccatcgagctatgagcgtgtcgccgaaagc
caacaacaagaatataaagaccgtggctacgatactagcaactggcacaccgatgacaat
gaaatcagccgtgtagcaccgacaggtaatcatagtgcctggagcaatgctagcaacgcc
accaacaccacgcctagccctgcaacgccatccaacaaatctcagcaaactgccaacaat
acgactgccgccaaagctgccgcgccccagcccgttcagccagctgccactgtgcctgca
acttctgcagtcgcttggttatcgaacttgtttgcccctacccagcaagcacaagtcacc
ccacactttagtggtcaagatgccgcttcggcgattgaaagtctcgtcaataccggcgca
caaagcttgggggtgcaaggtcaaatcaatcacgccgcattgacggcaagtatccctgcg
gtgagcgcaaacaccagtgaaaccagcgccaatccttatcaagaagcgtctcaacaacct
tcagccacggctgaatcaagcgataaagatgccgagcgccgtaaacgtggtaaccgcaag
ccaaaagctaaaaaaccaaaccgttatcaatctgaaacgagtgaagcagaagtttcatca
caggacactgacagcaataaagacaagtcaaatgatgcgtcaaaaactgccaaaactagt
gagctgccaaaacgcgagccgaatagtcgccgtgacagccgcggggtcaaagaacgtcgt
ccaacactagcgaatgaagatagtaacgcggctgtagtcaatgatgtgacagcgactgat
accgctgttgcccctgtcgatggtagaaaaaacaaccaatccagagcagaaaaaccgaaa
ggcaccaaacaacgtgaccccaacagtgtgcaagttcaagtatttaaaactgaacaacaa
caacctatagctgcggttgaaacaacgcatctctcgctagatgatagcaaaggggaaatt
gcaaaacctgaggcgcagccaatagcatcagcttcgatgcccgaacaggcaattcagacg
ccagttaaccctagcaacgttacagtgtccaatgacgaggtagcagagcttgctaaagca
tcgacaccatctgcgccatcagctgagccagtcactgcacagctggcagtgacaccgagc
caaggtcgtgccaaaaatgacccacgcgaagtctataaggcttatcaagcgcaatttagc
ccagttgcctctgtagtgagcacttcggtgacaaaaatttcaggtacggtgagtcagttt
attaaccagtacttagataatgccgctgaaaaaatggcaagcgacagcgtggttagctgc
tttatccaagccatcgatgcttttaatcatcaagctgctactaccactacccccgcaaaa
gataatgtcgtagtggctgaacaacagcgttttgggcagtactttagaaattatggctat
gccagtctatccgcgcaaaatttggatgattatcatacggccattttgccagccaatcag
ttccaacgccaagcaggcaaaactgacgctgcactaccagcggtaactaaacgcgccatc
aatgacccacgcggttctttggttaatactgctgtcactcaagcgccgactgactcaaac
ccgtcagttgctgagcctatctcgaatgaaactgacagtggcaaaggtcaagtagaagca
gcctcaactcaatcagcgtcgcctaaccaaaaccatctgtcctatcaagcaggtaccgta
ggcgcatggattgtggcgcgtttgggcgagcaaggtcatgctttgattgggcaaggtaaa
ttggtcgaagcttacttgcaagcacacaatgcgccagtcgctaaccgaccaaccgagccg
gtctctgtgacaacaatagcagatgacgctacagccaatcaggacgttgacttagtgcca
acagctgatgaatccgcagtagcctttaatactgacagcgaaggtgttgaagcaacggac
gtagaagatagcgcagaagcagcggcgcaaaaacgtaaaaccacaccggtaagttataag
aacatgattgaaagtgtggcagagcaaatgaaaccggcaaccgttggtatgctgaccttg
gcaaccccaaaagcacccaaaacccggacgcgtaaagctaaggcgagcgaaaaaccagca
gccaaacccaaaacgcgtaccagtaaaaaggtggaaaatgccgtggttgtcactaaaaaa
tccaccaccactccccaaactgacgtagcgccctctcacgatgagtcggtaacgccgcag
cacaatcagtaa
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