Moraxella sp. DOX410: RNZ41_06475
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Entry
RNZ41_06475 CDS
T10479
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mow Moraxella sp. DOX410
Pathway
mow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RNZ41_06475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mow03019
]
RNZ41_06475
Enzymes [BR:
mow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RNZ41_06475
Messenger RNA biogenesis [BR:
mow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RNZ41_06475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Helicase_C_2
Cas3-like_C_2
AAA_RNF213_5
AAA_30
RME-8_N
ILEI
Motif
Other DBs
NCBI-ProteinID:
WNP26757
LinkDB
All DBs
Position
complement(1464483..1465658)
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AA seq
391 aa
AA seq
DB search
MFQTFSQLPLYPALKQAIDQLGYQTLTPIQAQILPNTLAGQDAIGQAQTGTGKTATFLLT
IINELLNNPLNPEVDGDRFLGETRALVLAPTRELAQQIYQDCLELTKFTKLHTVCLLGGT
DYDTQSKQLHQKFVDIIIATPGRLIDFCFQHHVYLDRLEILVLDEADRMLDMGFIPDIKR
LIRMMPANTHRQTLLFSATFNQDVMNLAYRWLYQPIFVEIAPEQKTSQNIEQLFFTLMES
DKLAALQQIIEKISPNKIIVFANRKDQVKRLYDKLNRQYKVVILSGDVIQAKREKYLAQF
RQGDANILVATDVAGRGIHVDDVACVVNYTLPDSPDDYVHRIGRTGRAGNKGMSISFISE
NDGFNLPAIEQYLDESIKMQQWSNDTRFLED
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtgtttcaaactttctcacaattacccctttatccagcgcttaaacaagcgattgatcaa
ttaggctatcaaacgctaacccctatccaagcgcaaatattgcccaatacactcgctggg
caagatgccatcgggcaggcacaaacaggtacaggtaagacagcaacgtttttactcacc
atcatcaatgaattgctgaataatcctctaaaccctgaggttgatggcgatcgttttttg
ggtgaaacccgtgcgctggtgctggcgccgactcgagaactggctcaacaaatttatcaa
gattgccttgaactcaccaagtttaccaaactgcatactgtttgtttgctcggtggtaca
gactatgacacgcagtcaaagcagctgcatcaaaagtttgtcgatatcatcatcgccacc
ccaggtcgtttgattgatttttgctttcagcaccatgtgtatcttgatcgtcttgaaatt
ttggtattagatgaagcggatagaatgctggatatggggtttatacctgatatcaaacgg
ttgattcgtatgatgcctgccaatacgcatcggcaaactctgcttttctccgctaccttt
aaccaagatgtgatgaatttagcttatcgctggttatatcaaccgatttttgtagagatt
gcgcccgaacaaaaaaccagtcaaaacatcgagcagctattttttaccttgatggaatcg
gataaactggcggcgttacagcaaattattgaaaaaatttctcccaataaaatcattgtc
tttgccaatcgtaaagaccaagtcaaacgcctgtatgacaaacttaatcgtcaatataaa
gtagtgatattgtcaggggatgtcatacaggccaaacgcgagaagtatttggcacaattt
cgtcaaggcgatgccaatattttagtggcgactgatgttgcagggcgaggtattcatgtg
gatgatgtggcttgtgtggtcaattacaccttgccagacagtcctgatgattacgttcat
cgtatcggtcgcaccggtagggcaggcaataaaggcatgagtataagctttatcagtgaa
aacgacggatttaacttaccggctatcgagcaatatttggatgaaagtatcaaaatgcag
caatggtcgaatgatacccgttttttagaggattaa
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