Candidatus Methylomirabilis oxygeniifera: DAMO_0566
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Entry
DAMO_0566 CDS
T02155
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Pathway
mox03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DAMO_0566 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mox03021
]
DAMO_0566 (rpoA)
03400 DNA repair and recombination proteins [BR:
mox03400
]
DAMO_0566 (rpoA)
Enzymes [BR:
mox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DAMO_0566 (rpoA)
Transcription machinery [BR:
mox03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DAMO_0566 (rpoA)
DNA repair and recombination proteins [BR:
mox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DAMO_0566 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
CBE67642
UniProt:
D5MKJ5
LinkDB
All DBs
Position
490550..491578
Genome browser
AA seq
342 aa
AA seq
DB search
MIQKFKGIQKPKRLECELESLTSTYGKFFAEPFERGFGLTIGNALRRTLLSAIEGAAVTA
VRITGALHEFSTIPGVKEDVTDIILNLKGLRLRLHVDHPKTLYLKAFSEGEVRAEHIVSD
PDVEVLNPDLRIATLEQDGKLELELEVRLGRGYVPAERNKREGQPVDVIAIDSIFSPIRK
VNFRVEDTRVGQVTDYNKLTLEVWTDGSVLPRDAIAYAAKILKDHLSIFTNFEEEPEGEG
VVVDEARKQLLDNLNRSVDELELSVRSANCLKHSDIRYIYELVVRSEAEMLKTKNFGRKS
LNEIKEILTGMGLTLGMKLEGLPVGESIGKRGDKTSKALTGA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagtttaagggcatccagaagccaaaacggctggagtgcgagctggaatct
ctgaccagcacatacggcaagttttttgcggagccctttgaacgcggattcggattgacc
atcggtaatgcgcttcggcgcacccttctttccgccattgagggggccgcggtgaccgcg
gttcgaatcaccggggcgctgcatgaattctccacgatccctggggtgaaagaagatgtt
accgatatcattctcaatctcaaggggctgcggctgcgacttcacgttgaccatcctaaa
acattatatctaaaggcgttttcagaaggagaggttcgagccgagcatattgtttcggat
cccgatgtcgaggtcttgaacccggatctgcgtattgcgacgttggagcaggatgggaag
cttgagctggaattggaggttcgcctcggacgcggctatgttcctgcagagcgaaataaa
cgagaggggcagcccgtcgatgtcattgccatagactctatcttctccccgatccggaaa
gtcaatttccgggtcgaagacaccagggttggccaggtcaccgactacaataagctgacc
ttggaagtctggactgacggcagtgtcctgccccgcgatgccattgcgtatgcggcaaag
atcctcaaggatcacctgagcatctttacaaactttgaggaagagccggagggtgagggg
gttgttgtcgacgaggcgaggaagcaactgttggacaacctcaatcgaagtgttgatgaa
ctggagctgtcagtacgatcggccaattgtttgaagcactcggatattcgatatatctac
gaattggttgtcaggagtgaggccgagatgttgaagacaaaaaatttcggccggaagtct
ctgaacgaaatcaaggagatccttaccggtatggggttaaccttagggatgaaactggaa
ggcctccctgttggcgagtcgattgggaaacgcggtgacaagacctcgaaggccttaacg
ggggcctga
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