Candidatus Methylomirabilis oxygeniifera: DAMO_0578
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Entry
DAMO_0578 CDS
T02155
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mox03016
]
DAMO_0578 (truB)
Enzymes [BR:
mox01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DAMO_0578 (truB)
Transfer RNA biogenesis [BR:
mox03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DAMO_0578 (truB)
Prokaryotic type
DAMO_0578 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CBE67653
UniProt:
D5MKK6
LinkDB
All DBs
Position
501027..501968
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AA seq
313 aa
AA seq
DB search
MELSGVLNINKPGGMTSHDVVDVVRRLLKMRRIGHTGTLDPRATGVLPLCVGRATRIAQF
LTQADKEYLITMQLGITTDTLDADGKVLSRTDHIDVDPARLREVLESFVGEIQQVPPLFS
AKKHHGERLYRLARRGETVERQPVAIRIYDLTLLECDLPFVRFRVSCSKGTYARTLCDDV
GRVLGCGAHLYALTRVRSGRFLIEDALTLEQLEQAVVEDRIRDVLIPIGEALGHLPVVRI
HPESSRGVVQGGGMAAGTLLSFPMEVEKGDLVRVLGYRRQLLSLAEATVAGREFSTVDPR
RIVLKPVRVLAGQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaactcagcggagtcttgaatattaataagcctggggggatgacctcccatgatgtg
gtggacgtggtgcggcgtctactgaagatgcgccgtatcgggcataccggtacgctcgat
ccgagggcgaccggcgtgctgccgctctgcgtcggacgggcgacccgaatcgcacagttt
ctgactcaggccgacaaagagtacctgatcaccatgcaactgggcatcacaactgatact
ttggatgctgacgggaaggtgttgtccaggacggatcatattgatgtagaccccgccaga
ctgcgagaggttctggagagttttgtcggagagattcagcaggtaccgcccctgttttcc
gcgaagaagcatcacggggagcgactctatcgtctggctcgccgcggtgaaacggtcgaa
cgacagccggttgcgattcgaatctatgacctgacactgctggagtgtgacctgcccttc
gtccggttccgggtgagttgttccaaggggacatatgcccgcacgctgtgcgatgatgtc
ggtcgagtcctcggctgcggcgcgcacctgtatgcgttgactcgcgttcggtccggccgt
ttcctgattgaggatgcgctgacgctggagcaactggagcaggccgttgtggaggaccgc
atccgggacgtactgatccccatcggggaggcgctggggcacctcccggttgtcaggatc
catccggagtcctctcgaggcgttgtccaggggggcgggatggcggccggaacgttgctc
agttttcccatggaggtggagaagggggaccttgtcagggttctgggatatcggcgccag
cttctttcgttggcggaggcgacggttgccggtcgagaattctccacagtcgatccgcgc
cggattgtcttaaaaccggtacgggtcctcgccgggcaatga
DBGET
integrated database retrieval system
