Candidatus Methylomirabilis oxygeniifera: DAMO_2299
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Entry
DAMO_2299 CDS
T02155
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Pathway
mox00470
D-Amino acid metabolism
mox00550
Peptidoglycan biosynthesis
mox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DAMO_2299 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DAMO_2299 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mox01011
]
DAMO_2299 (murD)
Enzymes [BR:
mox01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DAMO_2299 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mox01011
]
Precursor biosynthesis
Amino acid ligase
DAMO_2299 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
CBE69349
UniProt:
D5MI56
LinkDB
All DBs
Position
complement(1972612..1973994)
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AA seq
460 aa
AA seq
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MIDLAGKRVVVIGLARSGEAACRLLLKQGAAVVGTDRRGEREVGADLCSLEQDGVSLELG
KQYLRSLPSADLVVVSPGIDLREPRFRRVREAGIPLIGEVELAYRYSDATFIGITGTNGK
STTTTLIGAMLKQAGLPSYVAGNIGTPLCRVAPSLAAGECVVAELSSFQLETIDEFRPRV
ALLLNLAPDHLDRYDQVEDYYRAKARIFENQRPSDFAVINADDPLVLQVSAQARGRRIAF
SRTRPLDTGAYVEDDQLMLALDGVREVICRKSELKIQGVHNLENALAAGLAAAVAGTPTT
AIRIALTSFEGLEHRLEFVAEIAGVRYINDSKGTNVGAVVRSLESFTNPVVLIAGGRDKH
GDFAPLIPLVRERVKRLILIGEAAETLRRMLASVCPTEVVSSLEEAVRRAAAAASPGEVV
LLSPACASFDMFTDFEDRGRVFKAAVRGLVSPADSIQGQA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatctggccggcaaacgtgtggtggtgatcgggttggcgcgatcgggagaggcg
gcctgccgtctgttgctcaaacagggcgctgccgtcgtcggtaccgatcgcaggggtgag
cgtgaggtcggcgccgacctctgtagcctggagcaggacggcgtcagtcttgagctgggt
aagcagtatctgcgctctttgccctcggccgatctcgttgtcgtcagtccggggatcgat
ctgcgtgagccgcggtttcggcgggttcgtgaggcgggtatcccgctgatcggcgaggtc
gaattggcctaccgatatagtgacgccacgttcatcgggattaccgggaccaacggcaaa
agcactaccacaaccctgattggcgccatgctgaagcaggccggcctgccttcgtatgtg
gccggcaacatcggtacgccgctctgccgggtggcgccttccctcgctgcgggagagtgt
gtggttgcagagctgtcgagttttcaactggaaacgatcgatgagttcaggccgcgtgtg
gcgttgctgctaaatctcgcccctgatcatcttgatcgctacgatcaggtcgaagactat
taccgggccaaggctcgtatcttcgagaatcaacggccgtccgactttgccgtcatcaat
gcggacgatccgctggttcttcaggtgtcggcacaggcccgaggacggaggatcgcattc
agccggaccagaccgctcgatacgggggcgtatgttgaagacgatcagctcatgctggcc
cttgacggggtgcgagaggtcatctgccggaaatccgaactgaagattcagggtgtgcat
aatctggagaatgcgctggccgccggcctggcggcggcggtagccggtacccccacgaca
gcgatccggatagcgctcaccagtttcgaggggctggaacatcgtctggagtttgtcgcc
gagatcgccggcgttcgctacatcaacgactccaaagggaccaatgttggagcggtcgtc
cgatcattggagagttttacgaaccctgttgtgctcatcgccggcggcagggacaagcat
ggcgatttcgcgccgctcatcccccttgtccgcgagcgggtcaaacggctgattctgatc
ggtgaggctgctgagacgctgcggcgcatgctcgcgtctgtttgtccgacagaggtggtg
tcgagtcttgaggaggccgtacggcgcgctgcggctgccgcttctccgggagaggttgtc
ttgctgtcgccggcctgcgccagcttcgatatgtttactgattttgaggatcgtggacgc
gtcttcaaggcggcggtccgagggcttgtgtcccccgctgacagcatacagggacaggcg
tga
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