Candidatus Methylomirabilis oxygeniifera: DAMO_2333
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Entry
DAMO_2333 CDS
T02155
Symbol
uvrB
Name
(GenBank) UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Pathway
mox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DAMO_2333 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mox03400
]
DAMO_2333 (uvrB)
DNA repair and recombination proteins [BR:
mox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DAMO_2333 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DAMO_2333 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_16
Microtub_bd
SWI2_SNF2
AAA_22
AAA_5
Motif
Other DBs
NCBI-ProteinID:
CBE69381
UniProt:
D5MIM4
LinkDB
All DBs
Position
complement(2006667..2008691)
Genome browser
AA seq
674 aa
AA seq
DB search
MSNFKLVCDYQPKGDQPQAIRRLVEGCLQGRPHQVLLGVTGSGKTFTMANVIAAIERPTL
IIAHNKTLAAQLFEEFKAFFPHNAVEYFVSYYDYYQPEAYLPVTDTFIEKDSMINDQIDK
LRHSATRSLLERRDVVIVASVSCIYGLGSPEAYYGMMVFLERGGRCDREAMLRKLVEIQY
QRNEYDLHRGTFRVRGDVVEIFPAYADTVVRVELFGDEVEGLWEIDPVTGERIQMLYRVP
IYPATHYVTPHDRREAAFAAILEELNEQVTSFEKAGKLLEVQRLKQRTCFDLEMMREVGV
CKGIENYSRHLSGRATGEAPPTLMDYLPRDALVIIDESHQTIPQIRGMYHGDRSRKETLV
EYGFRLPSAMDNRPFTFEEFERAVGQIIYVSATPGPYELAKVKGEIVEQIIRPTGLIDPE
IQVRPIRGQIDDLIGEVRAITARGHRVLITTLTKRMAENLTEYLAEVGIKVRYLHSDIDT
LKRNEIIRELRLGRFDVLVGINLLREGLDIPEVALVAILDADKEGFLRSSGSLIQTIGRA
ARNVEGRVVLYADTITDSMRRAMEETERRRERQIAYNREYGITPESIKKSISDVLSSVTE
KDYYTVPAAPDVEEVGRVTQEELPAYIEQLEKEMRAAAKRLEFERAAELRDRIREMEKHR
VGVVGEQTRREERS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtctaactttaagctcgtgtgcgactatcagccgaagggcgatcaacctcaggcgatc
agaaggctggttgaggggtgcctgcagggccggccccaccaggtgctcctgggcgtgacc
ggttcgggcaagacctttaccatggcgaacgtgatcgcggccatcgagcgtcccacgctg
atcattgcgcataacaaaaccctggcggctcagctctttgaagagttcaaagcgtttttc
ccgcacaatgccgtcgaatacttcgtcagctactacgactactatcaaccagaggcgtac
ctgcccgtcaccgataccttcatcgagaaggattcgatgatcaacgatcagatcgacaag
ctgcgccattcggccacgcgctcgctgctggagcggcgcgacgtggtcatcgtggcctcc
gtctcgtgcatctacggcctgggttccccggaggcctattatgggatgatggtctttctg
gagcggggcggccgttgcgatcgggaggcgatgctccggaagctggtggagatccagtat
cagcggaacgagtacgatctgcaccgcggaacgttcagggtccgaggggacgtcgtggag
atctttccagcctacgccgatactgtggttcgggtggagctgttcggcgacgaggtggaa
gggctgtgggagatcgacccggtcacgggcgagcggatccagatgctctaccgggttccc
atctatccggccacgcactatgtcaccccccacgaccgtcgagaggcggcctttgcggcg
atcctcgaggagctgaatgaacaggtgacgtcctttgagaaggccgggaaactccttgag
gtgcagcggctgaagcagcgaacctgcttcgacctggagatgatgcgggaggtcggggtc
tgcaaggggatcgagaactactcgcgccacctgtcgggtcgggccacgggcgaggcgccc
cccacgctgatggactatctgccaagggatgccctggtcattatcgatgaatcgcatcaa
acgattccgcagatccgcggcatgtatcacggcgaccggtcccgcaaagagacgctggtc
gagtacgggttccgccttccgtccgctatggacaatcgaccctttacctttgaagagttc
gagcgggccgtgggtcagatcatctatgtatcggcgacgcccggcccctacgaactggca
aaggtcaaaggggagatcgtggaacagatcatccgacccaccggactgatcgatcctgaa
atccaggtcaggccgattcgcgggcagatcgatgacctgatcggcgaggtccgggcgatc
accgcgagaggtcatcgcgtcctgatcaccacgctgaccaagcggatggccgagaacctg
actgagtacctcgccgaggtcgggattaaggtccgctacctgcactccgatatcgatacg
ctcaagcgaaacgagatcatccgcgagctgagacttggaaggttcgatgtgctggtcggg
atcaatctgttgcgggaaggactggatattcctgaggtcgcgctggtggctatcctggat
gccgacaaggaggggttcctgcgctcctccgggtctcttattcagaccatcggccgtgcc
gcaagaaacgtcgagggacgggtggtgctgtatgccgataccatcaccgactcgatgagg
cgcgccatggaggagaccgagcggcgacgcgagcgacagatagcctataaccgcgagtac
ggcatcacgccggaaagcatcaagaagtcgatctccgatgtcctgtcgagcgtcactgag
aaggactactatactgttccagccgcgcctgacgttgaggaggtcggccgtgtcacgcaa
gaagagctgccggcttatatcgagcagttggagaaagagatgcgggcagcagcgaagcgg
ctcgagtttgagcgagcggcggagcttcgagatcgaatcagggagatggagaagcaccgg
gttggtgttgtcggggagcagacgaggcgggaggaaagaagctaa
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