Candidatus Methylomirabilis oxygeniifera: DAMO_2409
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Entry
DAMO_2409 CDS
T02155
Name
(GenBank) Putative transcriptional regulator, AsnC family; likely to be a fused nirD/G and nirL/H, involved in heme D1 biosynthesis for nitrite reductase
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Pathway
mox00860
Porphyrin metabolism
mox01100
Metabolic pathways
mox01110
Biosynthesis of secondary metabolites
mox01240
Biosynthesis of cofactors
Module
mox_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
DAMO_2409
Enzymes [BR:
mox01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
DAMO_2409
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GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CBE69457
UniProt:
D5MIV0
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Position
complement(2066552..2067706)
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AA seq
384 aa
AA seq
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MFEMDAIDRKLLDAIQAGIPLVERPYRALGESVGLTEDDVIERIARLKAEGFVRNIGAIF
DTSRLGYRSSLVGFRLREECVDEAAAQINAHPGVSHNYLRRYTLPDTFGVNACCPFNVWF
TLAVSPESRLGLESSVAVLARDTGAEAARLFPALRVFKIGVRLDMDVDAAGVRKEEGHFF
TGNGHSERGLDPEERLIVRVLQDDLPLAGEPFREAARQCGLGVEAMLVCAQELLQRHIMR
RFAAILHHRKAGYTGNVMAAWSVPEEKVESVGHQMAQFRAVSHCYQRPTFPEWPFSLFTM
VHQKSREACEETVAAISGETGIEHYAMLWTVREFKKVRLRYFTGEDTAWEEKAATQISPK
APMSPGDQAVAGESVASRHSVLTQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagatggatgcaatcgatcgtaaactattggatgcgatccaggccggcatcccg
cttgtagagcgcccttatcgcgccctcggcgagagtgtgggccttactgaagacgatgtg
atcgagcgcattgcccggctcaaagctgaaggttttgtccgaaatatcggtgccattttc
gatacgtcgcgccttggctatcgatcatcgctggtcggcttccgattgcgtgaggagtgc
gttgacgaggcggccgcgcagattaacgctcatcccggggtaagtcacaactatctccgc
aggtatacgcttccggacaccttcggtgtaaatgcctgttgtccgtttaatgtatggttt
acccttgctgtttccccagagagtcggttggggctcgaatccagcgtcgcggtgttggcg
cgagatacgggcgccgaggcggcacgactctttccggcgctcagggtctttaagatcggg
gtacgcctggatatggatgttgacgcagcaggcgtacgtaaggaggagggccatttcttc
acgggcaacggtcattccgagcgtggtctagatccagaggagcgcctgatcgtgcgggtt
ctccaggatgatctgccgcttgcaggggagccgtttcgcgaggctgccagacagtgcgga
ctgggtgttgaggcgatgttggtctgtgcacaagagcttctccagcggcacatcatgcgc
cgctttgcggcaatcttacaccaccgcaaggccggctacaccgggaacgtcatggcggcg
tggtcggtgccggaagagaaagtagagtccgttggacatcagatggcgcagtttcgcgcg
gtcagtcactgctatcagcgccccacctttccggagtggccgttttcgctctttacgatg
gtccatcagaagagccgggaagcatgcgaggaaacggttgcagcgatcagtggagagacg
gggatcgagcattacgcgatgctgtggacagtacgggaattcaaaaaagttcggctgaga
tatttcaccggagaggatacagcctgggaggaaaaagcggcaacacagatttctccgaag
gcgcctatgagcccgggcgatcaggccgtagctggagagtcggttgcctcccgccattcc
gtattaactcaataa
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