Candidatus Methylomirabilis oxygeniifera: DAMO_2562
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Entry
DAMO_2562 CDS
T02155
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta (NS1) (HU-1)
KO
K03530
DNA-binding protein HU-beta
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mox03032
]
DAMO_2562 (hupB)
03036 Chromosome and associated proteins [BR:
mox03036
]
DAMO_2562 (hupB)
03400 DNA repair and recombination proteins [BR:
mox03400
]
DAMO_2562 (hupB)
DNA replication proteins [BR:
mox03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DAMO_2562 (hupB)
Chromosome and associated proteins [BR:
mox03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DAMO_2562 (hupB)
DNA repair and recombination proteins [BR:
mox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DAMO_2562 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2530
Motif
Other DBs
NCBI-ProteinID:
CBE69635
UniProt:
D5MJQ0
LinkDB
All DBs
Position
2201825..2202097
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AA seq
90 aa
AA seq
DB search
MTKAELVDKVAKDACITKKAAESALASVTAGIRDSLKKGKKVTLVGFGTFSVARRAARNG
RNPQTGDIIKIKAAKTPRFRAGKALKDAVR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggcggaactcgtggacaaggttgccaaggatgcatgcatcacaaaaaaggcg
gcggaatcggccctggccagcgtcacagcagggatacgggactcactcaagaaggggaaa
aaggtcaccctggtaggcttcgggacgttctctgtcgccagacgagcggcccggaatggg
cgcaatcctcaaacgggtgatatcatcaagatcaaggcagcgaagaccccgcgattcaga
gcgggaaaagccttgaaagacgccgtcaggtaa
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