Candidatus Methylomirabilis oxygeniifera: DAMO_2780
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Entry
DAMO_2780 CDS
T02155
Symbol
rfbB
Name
(GenBank) dTDP-D-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Pathway
mox00521
Streptomycin biosynthesis
mox00523
Polyketide sugar unit biosynthesis
mox00525
Acarbose and validamycin biosynthesis
mox00541
Biosynthesis of various nucleotide sugars
mox01100
Metabolic pathways
mox01110
Biosynthesis of secondary metabolites
mox01250
Biosynthesis of nucleotide sugars
Module
mox_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DAMO_2780 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DAMO_2780 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DAMO_2780 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DAMO_2780 (rfbB)
00525 Acarbose and validamycin biosynthesis
DAMO_2780 (rfbB)
Enzymes [BR:
mox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DAMO_2780 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
Motif
Other DBs
NCBI-ProteinID:
CBE69853
UniProt:
D5ML13
LinkDB
All DBs
Position
2389868..2390890
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AA seq
340 aa
AA seq
DB search
MRILVTGGAGFIGSNFIRHLLATESACHVVNLDKLTYAGNLENLTDVEHDPRYRFVKGSI
CDALLVDELLKEGFDALINFAAESHVDRSIQDARAFTETNVLGTQVMLDACRRHRVPRMM
QVSTDEVYGSLGAFGRFTEESPLHSNSPYAASKAAGDLLALAYCRTYGLPVIITRSSNNY
GPHQFPEKVIPLFITNALVGEPLPLYGDGLHIRDWLHVRDHCEALALILNNGVSGEIYNI
GGRCERANIDVARFILRTLGKPDTLIAHVKDRLGHDRRYALDASKLEQALGWSPRIAFEA
GLEETVRWYEDHATWWRRIKAGQYQEYYQKTYGDLSRVSP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattctcgtgaccggcggggctggatttatcgggtcgaatttcattcgccatctg
ctggcgacagaatcggcgtgccacgtcgtgaacctcgacaagctgacctatgccggcaac
ctcgaaaacctgacggacgttgaacacgatccgcggtaccgatttgtcaagggaagtatc
tgcgacgctctgctggtggatgagctgctgaaagagggattcgatgcgctgatcaacttt
gcggctgaatcgcacgttgatcggagtatccaggatgcgagagcgtttacggaaaccaat
gtgcttgggacacaggtgatgttggacgcgtgccgccggcatcgggtcccaaggatgatg
caggtctcgacggatgaggtatacgggtctctcggagcattcggtcgttttacggaggag
agtcccctccactcaaacagtccctatgcagccagtaaggcggcgggggacctgctggcc
ctggcctactgtcgcacctacgggctgccggtcatcatcacccggagttctaacaactat
ggccctcaccagttcccggagaaggtgattccactctttattaccaacgcccttgttggt
gaaccgcttccgctctacggcgacggcctccacatcagagattggctgcacgtacgggac
cattgtgaggccttggcgctgattctgaacaacggagtctccggagagatctacaatatc
ggcggtcgctgcgaacgggccaacattgatgtcgcacgcttcatcctgaggacgcttggc
aagcccgatacgttgatcgcgcacgtcaaggaccggctcggacatgatcggcgatacgcc
ctcgacgcgtcgaaacttgagcaggcgctgggctggagccctcgcattgcctttgaggcc
gggctggaggagacggtccgctggtacgaggatcacgcaacctggtggaggcgcatcaag
gcagggcagtatcaggagtattaccagaagacgtacggggacctctctcgcgtctctcca
taa
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