Candidatus Methylomirabilis oxygeniifera: DAMO_3025
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Entry
DAMO_3025 CDS
T02155
Symbol
kdsB
Name
(GenBank) CTP:CMP-3-deoxy-D-manno-octulosonate transferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
mox
Candidatus Methylomirabilis oxygeniifera
Pathway
mox00541
Biosynthesis of various nucleotide sugars
mox01100
Metabolic pathways
mox01250
Biosynthesis of nucleotide sugars
Module
mox_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
mox00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DAMO_3025 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mox01005
]
DAMO_3025 (kdsB)
Enzymes [BR:
mox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
DAMO_3025 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
mox01005
]
Lipid A
DAMO_3025 (kdsB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
P3A
Motif
Other DBs
NCBI-ProteinID:
CBE70098
UniProt:
D5MMH6
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All DBs
Position
complement(2619429..2620190)
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AA seq
253 aa
AA seq
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MQHHAKRTIVGVIPARLASTRLPGKVLRPICGRPMLYHVFARASRCGLLDDLVVATDSKE
VYDYCVGNRMKVRMTSSCHASGTDRIHEVMQTLSADIYVNIQGDEPMIRPAHLEVLLQSF
LKDPSVQVGTVKTLITAEEAHNPNCVKVVTDLDGRALYFSRHAIPYNRDRIAEIGYFKHL
GIYAYTGPALQRFHQLLPSLLEQTEKLEQLRFLEHGIPISVVETPYDTIGVDTEEDLARV
ERYFQERESLESA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcacgcaaagagaacgattgtcggcgttatcccggcgcggctagcctcgacg
aggctgccgggtaaagtccttcggccgatctgtggccggccgatgctctatcacgtcttt
gcgcgcgcgagccgatgcgggttgttggatgacctggtggttgcgaccgattcgaaggag
gtatatgactactgtgtcggaaatcggatgaaggtccgtatgacctcgagttgccatgca
tccgggaccgacaggattcacgaggtcatgcagacattatcggccgatatctatgtcaat
atccagggtgatgagccgatgatcaggcctgcgcaccttgaggtcctcttgcagtcattc
ctgaaagatccttctgtccaggtcggtacggtaaaaacccttatcacggcggaggaggcg
cacaaccccaactgcgtcaaggtcgtaacggatctcgacggaagagcgctctatttctct
cgccatgccatcccctacaaccgggaccggatcgctgagattggctacttcaaacacctg
ggcatctatgcgtataccggacccgcgcttcaacgcttccaccagcttctgccgtcactg
ttggaacagacagagaagcttgaacagcttcggttcctggagcatggcataccgatctct
gtcgtcgagaccccgtacgacaccataggggtagacaccgaagaggatctcgctcgcgtc
gagcgctattttcaggagcgcgaatccttagaaagcgcctga
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