KEGG   Candidatus Methylomirabilis oxygeniifera: DAMO_3134
Entry
DAMO_3134         CDS       T02155                                 
Symbol
mrdA
Name
(GenBank) Penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
mox  Candidatus Methylomirabilis oxygeniifera
Pathway
mox00550  Peptidoglycan biosynthesis
mox01100  Metabolic pathways
mox01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:mox00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    DAMO_3134 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    DAMO_3134 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mox01011]
    DAMO_3134 (mrdA)
Enzymes [BR:mox01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     DAMO_3134 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:mox01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   DAMO_3134 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: CBE70207
UniProt: D5MN65
LinkDB
Position
2714282..2716129
AA seq 615 aa
MSREREISNRYAPFQKRIRVAAILVSAAVLILVLRLWALQILEGDHLLQLSLNNRLRLRP
VEAPRGLILDRNGELLVENLASFDLYATPEDMPDVEDATRRLAEILQSSPDELRQRVSQG
QGSQLEPVLLRKGVDERIVAAIEEHKIDLPGVSLRVRPVRTYPNGGSAATLLGYVAEVSQ
TQLKSKEFRDFRPGETMGQAGIERRYDAFIRGVDGGEQVEVDALGKVNRLIRQVEPQSGF
SLHLTLDNRLQRVAEEALQGRSGALIAVHPSTGEILAMVSQPSYDPNQFSQRMTPDQWRK
LTGDPRHPMQNKGLQGQYAPGSIFKLVTALAALEKGSITPETKFSCDGVFSLGSHLFHDW
KKGGHGTLDLRQAIANSCNIYFYHTALKAGIGEIARVARELGLGAPSGLGLSGEARGIIP
PKPTVPPEAGGWYPGNTVMAGIGQGMVTVTPMQAVMMVSAIANGGSLYRPWVVRKVETLD
RDMIEEYGPELVRKVNIDPDNLAIVREGMQAVVSEGTGGRAKIPGLRVGGKTGTAQVVEN
KKSGSQRGDQRDNAWFVAFAPADHPQIAIAVVVEHGGFGGQVAAPIAKSLLEAWFKLPKE
SRPAQVAEAEPTEGD
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgagcagggaacgtgagatctcgaaccgctacgcccccttccagaaacggatcagggtg
gccgccatcctggtctcagcagccgtcctgatcctggtgctccgtctctgggcgctgcag
atcctggaaggcgatcatctactccaactctccctcaataatcgcctccgcctccgcccg
gtcgaggcgcccagagggctcatcctcgatcgaaacggagagctcctggtagagaatctg
gcctcctttgacctgtatgcgacaccggaggatatgcctgatgttgaggatgccacgcgg
cgacttgcggagatcctccagtcctcaccggatgagttgcggcagcgggtctcgcaagga
cagggctcacaactggagccggtgctgttacggaaaggagtggatgagcgaatcgttgcg
gccatcgaggagcacaagatcgatttgccgggcgtgagccttcgagtcaggccggtgcgc
acgtatccgaatggcgggtccgccgctaccctgctgggctatgttgccgaggtgagtcag
acgcaactcaagtcgaaagagtttcgagactttcgtccgggtgagacgatggggcaggcc
ggaatcgagcggcgatatgatgcgttcatacggggcgtcgacggcggggaacaggtggag
gtggacgcgctcggaaaagtcaaccggctgatccggcaggttgaaccgcagtccggattc
agtctgcatctcacgctcgataaccggttgcagcgggtcgcggaagaggccttgcagggc
agaagcggcgcgctcatcgcggttcacccatctaccggtgaaatcctggcgatggtcagc
cagccgtcgtacgatccaaaccagttctctcagcgcatgacccctgaccagtggcggaag
ctcactggtgacccgcgccatcccatgcaaaacaaagggctccagggccagtacgcgcct
ggctccatcttcaagctggtgaccgcgcttgccgctctcgagaaggggtccatcacgcct
gaaaccaagttctcctgcgacggcgtcttcagtctcggctcccatctcttccacgactgg
aagaaaggcggtcatgggacgttagatctccggcaggccatcgccaactcctgcaacatc
tacttctatcataccgccctcaaagccggaattggagagatcgcccgcgttgcccgcgag
ctggggcttggcgccccatccgggctcgggctgagcggtgaagcgcggggcatcatcccc
cccaagccaaccgttccaccggaggcaggcggatggtatcccggcaacaccgtgatggcc
ggaatcggacaagggatggtcactgtcacgccgatgcaggccgtgatgatggtctccgcc
attgccaacggggggtccctctaccgcccatgggtcgtgcggaaggtcgagacactggac
cgtgacatgatcgaggagtacggcccagaactcgtccggaaggtcaatatcgatcctgat
aatctggctatcgtcagagaagggatgcaggcggtcgtcagcgaggggacggggggtcgc
gccaagattcccggactccgggtgggcggtaagacggggaccgcacaggtggtagagaat
aagaagagcggttcgcagcggggcgatcaacgggacaacgcctggttcgtggcctttgca
cccgcagatcatccccagatcgccattgccgtggtggtcgagcacggcgggttcggcggt
caagtggctgcgccgattgcgaagagccttctggaggcgtggttcaagttgcccaaagaa
tcgaggccggctcaggttgctgaggcggaaccgaccgaaggcgactga

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