Microbacterium oxydans: CVS54_00603
Help
Entry
CVS54_00603 CDS
T06672
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
moy
Microbacterium oxydans
Pathway
moy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVS54_00603 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moy03019
]
CVS54_00603 (recQ_1)
03400 DNA repair and recombination proteins [BR:
moy03400
]
CVS54_00603 (recQ_1)
Enzymes [BR:
moy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVS54_00603 (recQ_1)
Messenger RNA biogenesis [BR:
moy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CVS54_00603 (recQ_1)
DNA repair and recombination proteins [BR:
moy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CVS54_00603 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZS39301
UniProt:
A0A3Q9J4R3
LinkDB
All DBs
Position
621808..623859
Genome browser
AA seq
683 aa
AA seq
DB search
MPQTPRDPYADLPYADEPYDDGWESSYPPEPMDWEPQGAGFEPPLDWGQGPVTPVTSSAT
SSTTSSSTVRPPVERRATPSRYATARDALHTVFGYDDFRGDQAEIVEQVIAGGDAVVLMP
TGGGKSITYQVPALVREGTGLVISPLIALMHDQVDALRANGVKAAYLNSTQAIDERREVE
RAYVAGELDLIYVAPERLSNSQTTALLQRGTLSVIAIDEAHCVSQWGHDFRPDYLTLGDL
GERFPGVPRMALTATATAATHKEITERLHLDGAAHFVASFDRPNIQYRIVPKVDPRKQLV
QFIRSQPEGAAGIVYALSRKSVEQTATYLAAQGFDALPYHAGLPGEVRAANQARFLREDG
VVMVATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGEPSVAWMAYGLGDVVQ
QRRLIDQSPGDRTFKMRMGQHLDAMLALCETVECRRQNLLGYFGQESQPCGNCDTCLDDT
ETFDGLVPAQKLLSTIVRLKRERNQAFGAGHLIDILRGASTERIRQQDHDKLATYGIGSD
LSDQDWRSVVRQLLARGILVAQGDYGTLAPGEQAAGVLRGETAVPLRKDTIGRPTSSGRA
RKASAADALDAGDRPLFEALRAWRAETAREQGVPAYIVFGDATLRALAEHRPAALADLDG
ITGIGAKKREAYGEGVLAVIAGA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagactccccgtgacccgtacgcggatctgccgtacgccgacgagccctacgac
gacggctgggagtcttcctacccgccggagccgatggactgggagccgcagggggccggg
ttcgagccgccgctggactggggtcagggtccggtcacgccggtcacctctagcgccacg
tcttccaccacctcttctagtaccgtgcgcccgcccgtcgagcgccgcgcgacgccgagc
cgctatgccacggcgcgcgacgcgctgcacacggtgttcggatacgacgacttccgcggc
gaccaggccgagatcgtcgaacaggtcatcgcgggcggagacgccgtggtgctgatgccg
accggaggcggaaagagcatcacgtaccaggtgcccgcgctggtgcgcgagggcacgggt
ctcgtcatcagcccgctcatcgcgctcatgcacgaccaggtcgatgcgctgcgcgccaac
ggcgtgaaggccgcctatctcaactccacccaggctatcgacgagcgtcgcgaggtggaa
cgggcctatgtcgccggcgagctcgacctcatctacgtggcgcccgagcgtctctccaac
tctcagaccacggcgctgctccagcgcggaacgctcagcgtgatcgcgatcgacgaggcg
cactgtgtgtcgcagtggggtcatgacttccgccccgactacctgaccctcggcgacctg
ggcgagcggttccccggggtgccgcgcatggctctcacggcgacggccaccgcggcgacg
cacaaggagatcaccgagcgcctgcacctcgacggcgcagcgcacttcgtggcgagcttc
gaccgcccgaacatccagtaccgcatcgtgccgaaggtcgatccgcgcaagcagctcgtc
cagttcatccgctcgcagccggagggcgcggcgggcatcgtgtacgcgctcagccggaag
tcggtcgagcagacggctacctatctcgccgcccaggggttcgacgccctgccataccac
gcgggtctgcccggcgaggtgcgcgccgcgaaccaggcgcgcttcctccgcgaggacggc
gtcgtcatggtcgccaccatcgcattcgggatgggcatcgacaagccggatgtgcgcttc
gtcgcgcacatcgatctgccgaagtccgtggagggctattaccaggagaccgggcgcgcc
ggtcgagacggcgagccctcggtggcctggatggcttacgggctcggcgacgtcgtgcag
cagcgcaggctcatcgaccagagtcccggtgatcgcaccttcaagatgcgcatggggcag
cacctcgacgccatgctcgcgctgtgcgagaccgtggagtgtcgtcggcagaacctgctc
ggctacttcggccaggagtcgcagccgtgcggcaactgcgacacctgcctcgacgacacc
gagacgttcgacgggctcgtcccagcacagaagctgctgtcgacgatcgtgcggttgaag
cgcgagcgcaatcaggcgttcggcgccgggcacctgatcgacatcctccgcggggcctcg
acagagcgcatcaggcagcaggatcacgacaagctcgcgacctacggcatcggcagcgat
ctctcggatcaggattggcgcagcgtcgtccgtcagctcctggcccgcggcattctcgtc
gcgcagggtgactacggcaccctcgcgcccggtgagcaggcggcaggagtactgcgtggt
gagaccgctgtgcccctgcgcaaggacacgatcgggcgtccgacctcgtcgggccgcgcc
cgcaaggccagcgccgccgatgccctggacgcgggggatcggccactgttcgaggcactg
cgtgcatggcgtgctgagaccgctcgcgagcagggcgtgcccgcgtacatcgtgttcggt
gacgcgacgctgcgcgcgctcgcggagcaccgccctgctgctctcgccgacctcgacggc
atcaccggcatcggtgcgaagaagcgcgaggcgtacggcgaaggcgtgctcgcggtgatc
gccggcgcctga
DBGET
integrated database retrieval system
