Microbacterium oxydans: CVS54_00857
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Entry
CVS54_00857 CDS
T06672
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
moy
Microbacterium oxydans
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moy03400
]
CVS54_00857 (sbcC)
DNA repair and recombination proteins [BR:
moy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVS54_00857 (sbcC)
Archaeal homologous recombinant proteins
CVS54_00857 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
AAA_15
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AZS39547
UniProt:
A0A3Q9J6L7
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All DBs
Position
881729..884713
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AA seq
994 aa
AA seq
DB search
MRLHRLEVEGFGPFRSRQTVDFDAFADDGIFLIAGRTGAGKSSILDAVCFGLYGGVPRYE
GGEKRLRSDHCEPDDPSEVVVEFSTPAGRYRVTRSPEYLRPAKRGGGMTKQAAAVSLDEW
TDSGWIGRAARAVDVAGELDEILQLSREQFLQVILLAQNRFSEFLLAGSRDRQALLRRLF
GTQRFEDVQARFDDRRRAAEQVLGSRLAAVEARIDEAENLVVAGGLSGDGDDTVAETSQA
PASIDERLEALRRAKARADYRAERRASDRADAEQQSTAADAELAIAREERRAQQERDRAR
SALERLDAEAPSIEHARAELAASRAAESLRPIIAAAARAAGALEAAGLEEQNARVTGQAM
GLPVDDDLEAWAQERTREIGAWQRARELEESAPALDAEVRAAEEAVAVVTARIQAADAKR
AALPEEVTALNASRDAARSLADRVEDRRAAQETADARRVAAREAERLRTAELSVDVELTQ
ATALHAAAQSTLAELRRRRTDGMAGELASTLRHEQPCPVCGSLEHPAPATHADPVSPEDI
AVAEEARDSAARREGELASRSSALRAELAAATARADGRDVERAETEYEEAAAALADSRAA
VETLTALDTQLADLVTRLEHLDTEREDDARALAEAREQHAVLRQRRTEARELIAAARAAF
PTVAERLADNEAKVAAARALSQAISERVRRAEALVGAQAQRDAGLADSVFADEVAAVEAL
RPLSVQEALDARITQHAVQREKERAVLFDLELRTLPEEPIDLAPAERASAEARSLWTTAV
DEAAKAAGAAERLGGLIDSAAIEQARSANEAAEFEVLQNLADTIAGRGVNTRKMTLETFV
LAAELEEIVEAANRRLHEMSTGRYQLRHSDALAARGAASGLGIVVFDAFTGQTRPPQSLS
GGETFLTSLALALGLAEVVTARAGGIRLDTLFIDEGFGSLDGDTLDVAMRTLDELRQGGR
TVGVISHVEAMQEQIPAQLTVRALPNGPSIIDAR
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcatcgtctggaggtcgaaggcttcggcccgttccggtcgcgacagaccgtt
gacttcgacgccttcgccgacgacggcatcttcctgatcgccggacggaccggggcgggc
aagtcgagcatcctcgatgcggtgtgcttcggcctgtacggcggggtgcctcgatacgag
ggcggcgagaaacgcctccgaagcgatcactgcgagcctgacgatccctcagaggtggtc
gtcgagttcagcacgccggccggtcgataccgcgtcacgcgctcgcccgagtacctgcgc
ccggccaagcgcggtggtggcatgaccaagcaggcggccgccgtgtcgctcgacgagtgg
acggacagtggatggatcggccgtgccgcgcgggcggtcgacgtcgccggcgagctcgat
gagatccttcagctcagtcgggagcagttcctgcaggtgatcctgctcgcacagaaccgg
ttctcggagttcctgctcgcgggcagccgcgatcgccaggcactgctgcggcggctgttc
ggaacgcaacgattcgaagacgtgcaggcgcggttcgacgatcgtcgccgtgcggccgaa
caagtgctcggcagtcgtctcgccgccgtcgaggcgcgtatcgacgaggccgagaacctc
gtggtcgccggcgggctgtcgggagacggcgatgacaccgtggcggagacgtcgcaggct
cccgcgtcgatcgacgagcggctggaggccctccggcgggcgaaggctcgcgccgactac
cgtgcggagcgtcgtgcctccgatcgcgccgatgccgagcaacagtcgaccgctgccgac
gccgaactcgccatcgcccgagaggaacgacgcgcgcagcaggaacgcgatcgagccaga
tccgccctcgaacgcctcgatgccgaggcgccgtcgatcgagcacgcccgtgccgagctc
gccgcgtcgcgcgccgccgagtcgcttcgtccgataatcgccgccgctgcgcgagcggct
ggagcgctcgaggctgccggcctggaggagcagaacgcccgcgtgaccgggcaggcgatg
gggcttcccgtcgacgacgacctcgaggcgtgggcgcaggagcgcaccagggagatcggc
gcctggcagcgggcgcgggaactcgaagagagcgcaccggctctggacgccgaggtgcgc
gccgccgaggaggcggtcgcggtcgtcaccgcacgcatccaggccgccgatgcgaagcgg
gccgcgctcccggaagaggtcaccgcactcaacgcatcgcgcgacgcggcgcggagcctg
gcagatcgggtggaggacaggcgggcggcacaggagaccgcagacgcacgtcgcgtggcg
gcgcgggaggcggagaggctgcggacagcggagctctcggtagacgtcgagctcacgcag
gcgacggcgttgcatgcggcggctcagtccacgctggccgagctgcgccggcgccgcacg
gacggcatggcgggagaactcgcgtcgacgctccgacacgaacagccctgtccggtctgc
ggctcgctcgagcaccctgcgccggccacgcacgccgatcccgtctcgccggaggacatc
gccgtcgcggaagaagcgcgcgactccgcggcccggcgggaaggcgagctggcatccaga
tcctctgcgctccgcgccgaactcgcggccgccaccgctcgcgccgacgggcgcgacgtc
gaacgtgccgagaccgagtacgaggaggccgctgcggctctcgcggacagccgagcggct
gtcgagacgctgaccgcgctcgacacgcagctcgcggacctcgtgacgcggctcgagcat
ctcgacaccgaacgagaagacgacgcgagggctttggccgaggcacgcgaacagcatgcc
gtcctgcgtcaacgtcgcacggaggcacgggagctgatcgccgcggcgcgggctgcattc
cccacggtcgccgaacggctggcggacaacgaggccaaggtcgcggctgcgcgtgcgctg
agccaggcgatctccgagcgcgtgcgcagggccgaggccctcgtcggcgcccaggcacag
cgcgacgccggtctcgcggactccgtgttcgctgacgaggtagcagcggtagaggcgctg
cgcccgctctcagtccaggaagcgctggacgcgcggatcacgcagcacgcggtgcaacgg
gagaaggagcgggccgtgctgttcgacctcgaactccgcaccctgccggaagagcccatc
gacctggcaccggccgaacgagcatcagcggaagctcgtagcctctggaccacggcggtc
gacgaggcagccaaggccgccggcgccgcggaacggctcggcgggctgatcgattctgcc
gcgatcgagcaggctcgcagcgccaacgaggccgcggagttcgaggtgctgcagaacctc
gcggacacgatcgcgggcaggggcgtcaacacccgcaagatgactttggagacgttcgtc
ctcgcggcagagctcgaggagatcgtcgaggcggccaaccgtcggctgcacgagatgtcc
accgggcggtatcagctgcggcactccgacgcgctcgcggcccgcggtgcggcttccgga
ctcggcatcgtggtgttcgacgcgttcaccggccagacccgaccaccgcagtcgttgtcg
ggaggtgagaccttcctcacgtcactcgcgttggcgctgggattggcagaggtcgtgacg
gcacgcgcgggcggcatccgcttggacacactcttcatcgacgaggggttcggttccctc
gacggtgacactctcgacgtggccatgcgcacactcgatgagttgcggcagggcggcagg
accgtcggcgtgatcagccatgtcgaggccatgcaggagcagatccccgcgcagctcacg
gtgcgagcgctgcccaacggccccagcatcatcgacgcccgctga
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