Microbacterium oxydans: CVS54_01058
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Entry
CVS54_01058 CDS
T06672
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
moy
Microbacterium oxydans
Pathway
moy03420
Nucleotide excision repair
moy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVS54_01058 (uvrD1)
03430 Mismatch repair
CVS54_01058 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moy03400
]
CVS54_01058 (uvrD1)
Enzymes [BR:
moy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVS54_01058 (uvrD1)
DNA repair and recombination proteins [BR:
moy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVS54_01058 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
CVS54_01058 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_16
EcoR124_C
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AZS39745
UniProt:
A0A3S9WI65
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All DBs
Position
1077350..1079821
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AA seq
823 aa
AA seq
DB search
MTEAPLIVPSTAGPRSSGTPGQDDLLAGLNPQQLEAVTYRGPALLIVAGAGSGKTSVLTR
RIASLLRSREAWPSQILAITFTNKAAGEMRERVEGLIGDAARGMWISTFHSACVRILRRE
AQQFGFTKNFTIYDSGDSRALIKRLVKEHEADAYGLTPAAVQGRISKLKNELSDAEGYAR
QANMSDPAERVFVEVFADYQRQLQKANAFDFDDLIGQTVYLFRAFPQVADTYRRRFRHIL
VDEYQDTNHAQYALIHELTRPVSGAGAASEPYASNGMMIFEPDPEPAPGAGEAGASLTVV
GDSDQSIYAFRGADIRNISEFERDFPGAKVVLLEQNYRSTQNILSAANAVIGNNFDRKDK
KLWSDKGDGDAIIGFTGYSQHDEAQFVADEVEALHRKGMPYSEMAVFYRTNSQSRALEEI
FIRSAVPYKIMGGTKFYERAEIKDALAYLVAVANPADEMSVRRILNKPRRGIGDVTETAI
ARFAEEHGISFRDALSLPGQLGVGPKIQAAIAQLDAALAEATAIMLPATGEVPPPTSVAD
GLSLLLSKSGYLDALRASRDPQDEARVENLDEFVAVTRDFARNNPEGTITDFLTEVALVS
DADDLDDESGSVSLMTMHTAKGLEYDAVFVTGVEEDLIPHRISAGEPGGPQEERRLFYVG
ITRARKRLHLSLAMTRAQFGEVTVAMPSRFLQEIPANLIDWRQSPGDVNSRGGMQSRALN
ARRQGGFGGSGSGDRFAVKSLPGRDSLKPLSTAMDKFPNRVTAKMRDNGDLELAAGDRIR
HVDFGEGRVDAVTGEGAKRIAHVRFDSAGQKKLLIKVAPIEKI
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagctcctctcatcgtcccctccacagccggtcctcgctcgtcgggaaccccg
gggcaggacgatctcctcgccggcctcaaccctcagcagctcgaggccgtcacctatcgc
ggcccggcgctgctgatcgtcgcgggcgccggatcgggcaagaccagcgtgctcacccgc
cgcatcgcctcgctgctgcgcagtcgggaggcgtggccgagccagatcctcgcgatcacc
ttcacgaacaaggccgccggcgagatgcgcgagcgtgtcgaagggctcatcggcgacgcc
gcgcgcggcatgtggatctcgaccttccactccgcatgcgtgcgcatcctgcgtcgcgag
gcccagcagttcggattcaccaagaacttcaccatctacgactccggcgactcgcgcgcg
ctcatcaagcgactcgtgaaggagcacgaggccgatgcgtacgggctcacccccgccgcg
gtgcagggtcgcatctccaagctgaagaacgagctgtccgatgccgagggctatgcgcgt
caggccaacatgtcggatcccgccgagcgcgtattcgtcgaggtgttcgccgactaccag
cggcagctgcagaaggccaacgccttcgacttcgatgatctgatcggccagaccgtctac
ctgttccgcgccttcccccaggtggcggacacctatcgccgccggttccggcacatcctg
gtcgacgagtaccaggacaccaaccacgcccagtacgcgctcatccacgagctcacccgg
ccggtgtcgggcgcgggtgcggcatcggagccatatgcctcgaacggcatgatgatcttc
gagcccgaccccgagccggcaccgggcgccggtgaggccggggcgtcgctcacggtcgtc
ggtgactcggaccagtcgatctacgccttccgtggtgccgacatccgcaacatcagcgag
ttcgaacgcgacttccccggagcgaaggtggtgctgctcgagcagaactaccgttccacc
cagaacatcctgtccgccgcgaacgccgtgatcggcaacaacttcgaccgcaaggacaag
aagctctggagcgacaagggcgacggtgacgccatcatcggcttcactgggtattcccag
cacgacgaggcgcagttcgtcgccgacgaggtcgaggcactccaccgcaaggggatgccg
tactcggagatggccgtcttctatcgcacgaactcgcagtcccgcgcgctggaggagatc
ttcatccgctccgctgtgccgtacaagatcatgggcggcacgaagttctacgagcgcgcc
gagatcaaggacgcgctcgcctatctcgtcgctgtcgccaaccccgctgacgagatgtcc
gtccgccgcatcctcaacaagccgcggcgcggcatcggcgatgtcacggagacggcgatc
gcccgcttcgcagaggaacacgggatctcgttccgagacgccctgtcgcttcctggccag
ctcggcgtcggcccgaagatccaggccgcgatcgcgcagctcgacgcggcgctcgccgaa
gcgacggcgatcatgctgccggcgacgggcgaagtgccgccgcccacctcggtggccgat
gggctcagcctgctgctgtcgaagagcggctacctcgacgcgctgcgagccagccgcgac
ccgcaggacgaggcacgcgtcgagaacctcgacgaattcgtcgccgtcacgcgcgacttc
gcccggaacaaccccgagggcaccatcaccgacttcctgaccgaggtcgccctggtgtcc
gacgccgacgatctcgacgacgaatccggctccgtatcgctcatgacgatgcacaccgcc
aagggcctggagtacgacgcggtgttcgtcaccggcgtggaggaagacctcatcccgcac
cgcatctcggcgggagagcccggagggccgcaggaggagcgtcgactgttctacgtgggg
atcacccgcgcccgcaagcgcctgcacctgtccttggcgatgacccgcgcgcagttcggc
gaggtcacggtcgcgatgcccagccgcttcctgcaggagatccccgcgaacctgatcgac
tggcggcagtccccgggcgacgtcaactcgcgcggcgggatgcagtctcgtgcgctgaac
gcccgtcgtcagggcggtttcggcggatcgggctccggagatcgcttcgcggtgaagtcg
ttgccggggcgagactccttgaagccgctgtcgaccgccatggacaagttccccaacaga
gtcacggccaagatgcgcgacaacggcgacctcgaactcgccgcgggcgaccgcatccgt
cacgtcgacttcggtgaaggacgggtggacgcggtgaccggcgagggcgcgaagcgcatc
gctcacgtgcggttcgactcggcgggacagaagaagctcctcatcaaggtcgcgccgatc
gagaagatctga
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