Microbacterium oxydans: CVS54_01503
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Entry
CVS54_01503 CDS
T06672
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
moy
Microbacterium oxydans
Pathway
moy03030
DNA replication
moy03430
Mismatch repair
moy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVS54_01503 (dnaE1)
03430 Mismatch repair
CVS54_01503 (dnaE1)
03440 Homologous recombination
CVS54_01503 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
moy03032
]
CVS54_01503 (dnaE1)
03400 DNA repair and recombination proteins [BR:
moy03400
]
CVS54_01503 (dnaE1)
Enzymes [BR:
moy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVS54_01503 (dnaE1)
DNA replication proteins [BR:
moy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVS54_01503 (dnaE1)
DNA repair and recombination proteins [BR:
moy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVS54_01503 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AZS40179
UniProt:
A0A3Q9J8H2
LinkDB
All DBs
Position
1536727..1540245
Genome browser
AA seq
1172 aa
AA seq
DB search
MASDSFVHLHVHSEYSMLDGAAKINAMTQAAAEYGMPAIAVTDHGNTFAAFEFYNAARNA
GIKPIIGLEAYMTPGTHRSDKTRVQWGSPDQKSDDVSGSGAYTHMTMWSQSTEGMHNLFR
ISSRSSMEGYYFKPRMDRELLQTYGKGLIATTGCPSGEIQTRLRLGQYDAARAAAAEFQD
IFGKENYFAEIMDHGLSIERRVMTDLLRLSKDLNIPLVATNDSHYTHQHEADAHEALLCV
QSGSTMDDPNRFKFDGDGYYIKTAAEMRQLFRDHPEACDNTLLIAERCEVEFNTSANYMP
RFPVPDGETEDSWLIKEVEAGLHYRYPGGIPDKVRKQAEYETGIILQMGFPGYFLVVADF
INWAKDNGIRVGPGRGSGAGSMVAYAMRITDLDPLEHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIDYVTEKYGSERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGERLTKAMPPPV
MGKDMPLDGMFDSAHPRYKEASEFRTLIETDPEAKTVFDRALGLEGLKRQWGVHAAGVIM
SSDPLLDIIPIMRREQDGQIVTQFDYPSCESLGLIKMDFLGLRNLTIISDALDNIRTNRG
EELDLEHLGLDDPGVYQLLARGDTLGVFQLDSPPLRSLMRLMKPDNFGDISALIALYRPG
PMGANSHTNYALRKNGLQEITPIHPELEAPLAEILQESYGLIIYQEQVMAIAQAVAGFSL
GQADILRRAMGKKKKSELDKQYEGFAGGMKERGFGEAAIKALWDILLPFSDYAFNKAHSA
AYGLVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMALYLNECRRMGIKVLPPDVSESINF
FAAVGDDIRFGLGAVRNVGSNVVEGIVKARKDERFTSFHHFLEKVPLHVSNKRTVESLIK
AGAFDSMGDTRRALYEVHEDAVEAAVDRKRNEAQGAIGFDFDSLYDGTEEVAPAKVPARP
EWVKKDKLAFEREMLGLYVSDHPLAGLEVPLAKHASISINDLNNSEDLQDGDQVTVAGLV
TSVQHRVAKASGNPYGMITVEDFNGEVTVMFMGKTYTEFQHTLQQDAILAVRGRVSRRDD
GLNLHAQSAFAPDVGSFDAAGPLALVLAEQRATERVMMELAEVLRRHNGDTEVVLRVHRG
GTAKVFEVPMPVKVSADLFGDLKSLLGPTCLG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgactctttcgtccacctgcacgtgcacagcgaatactcgatgctcgacggt
gcggcgaagatcaatgcgatgacccaggcggctgccgaatacggcatgcccgcgatcgcc
gtcaccgatcacggcaacaccttcgcggccttcgagttctacaacgccgcacgaaacgcc
ggcatcaagcccatcatcgggctcgaggcgtacatgacccccggtacccaccgcagcgac
aagactcgcgtgcagtggggctcgcccgaccagaagagcgatgacgtctcgggttccggc
gcgtacacccacatgacgatgtggagccagagcaccgagggcatgcacaacctcttccgc
atcagctcgagatcgagcatggaggggtactacttcaagccgcgtatggaccgcgagctg
ctccagacctacggcaagggactcatcgccacgacaggctgcccttcgggggagatccag
acacgtctgcgactgggacagtacgacgcggcgcgcgcggcggcggccgagttccaggac
atcttcggcaaggagaactacttcgccgagatcatggaccacggcctgtcgatcgagcgg
cgcgtcatgaccgacctgctccggctgtcgaaggacctgaacatccccctggtcgccacc
aacgactcgcactacacgcaccagcacgaggccgacgcacacgaggctctcctctgcgtg
cagtcggggtcgacgatggacgaccccaaccggttcaagttcgacggcgacggctactac
atcaagacagcggccgagatgcggcagctcttccgagaccacccggaagcatgcgacaac
acgctgctgatcgccgagcggtgcgaggtggagttcaacacctccgcgaactacatgccg
cgattcccggtgccggacggcgagaccgaggacagctggctcatcaaagaggtcgaggcg
gggctccactaccgctacccgggtggcatccccgacaaggtgcgcaagcaggccgagtac
gagaccggcatcatcctgcagatggggttccccgggtacttcctggtcgtcgccgacttc
atcaactgggcgaaggacaacggcatccgggtcggtcccggccgtggctccggtgccgga
tcgatggtcgcgtacgcgatgaggatcaccgacctcgatccgctcgagcacggactgatc
ttcgagcgattcctcaaccccgaccgtgtatcgatgcccgacttcgacgtcgacttcgat
gaccggcgccgtggcgaggtcatcgactacgtgaccgagaagtacggctccgagcgcgtc
gcgcagatcgtcacgtacggcaccatcaagtccaagcaggcgctgaaggacgccgggcgc
gtgctcgggttccccttcagcatgggggagcgtctcaccaaggcgatgccgccgcccgtg
atgggcaaggacatgcccctcgacggcatgttcgactcggcgcacccgcggtacaaggag
gcgagcgagttccgcaccctgatcgagaccgatccggaggcgaagaccgtcttcgaccgt
gcgctgggtctcgagggcctgaagcgtcagtggggcgtgcacgccgccggtgtgatcatg
tcgtccgacccgttgctcgacatcatcccgatcatgcgccgtgagcaggacggccagatc
gtcacgcagttcgactacccgtcgtgcgagtcgctcggtctgatcaagatggacttcctg
gggctccgcaacctcacgatcatctccgacgcgctcgacaacatccgcaccaaccgaggt
gaggaactcgacctcgagcacctcggcctcgacgaccccggcgtgtaccagctgctcgcc
cgcggagacaccctcggtgtgttccagctcgacagtccgcccctgcgttccttgatgcgg
ctgatgaagcccgacaacttcggcgacatctcggcactcatcgccctgtatcgtccgggg
cccatgggcgccaactcgcacacgaactacgccctgcgcaagaacggcctgcaggagatc
actccgatccatcccgaactggaagcgcctctcgccgagatcctgcaggagtcctacggg
ctcatcatctaccaggagcaggtcatggccatcgctcaggcggtcgccggcttcagcctc
ggacaggcagacatcctccgtcgtgccatgggcaagaagaagaagtccgagctggacaag
cagtacgagggtttcgccggcggtatgaaggaacgcggcttcggcgaggcggcgatcaag
gccctgtgggacatcttgctgcccttctcggactacgccttcaacaaagcgcactccgcc
gcgtacggcctggtgtcgtactggaccgcatacctcaaggcgcactatcccgccgagtac
atggcggcgctgctcaccagcgtcggcgactccaaggacaagatggcgctgtacctgaac
gagtgccgtcggatgggcatcaaggtgctcccgcccgacgtctccgaatcgatcaacttc
ttcgccgccgtgggcgacgacatccgcttcggcctcggagccgtgcgcaacgtcggcagc
aacgtcgtcgagggcatcgtcaaggcccgcaaggacgagcgcttcacttcgttccatcac
ttcctcgagaaggttcctctgcacgtctcgaacaagcgcaccgtcgagtccctgatcaag
gcgggcgcgttcgactccatgggagacacccgtcgcgcgctgtacgaggtgcacgaagac
gcggtcgaggcggcggtcgaccgcaagcgcaacgaggcccagggggcgatcggcttcgac
ttcgacagcctgtacgacgggaccgaagaggtcgcgccggcgaaggtcccggccagaccc
gagtgggtcaagaaggacaagctcgcgttcgagcgggagatgctcgggctctacgtgtcg
gaccaccctctcgccggactcgaggtaccgctcgcgaagcatgcgtcgatctcgatcaac
gatctgaacaactccgaagacctgcaggacggcgaccaggtgacggtggccggactcgtg
accagcgtgcagcaccgcgtggccaaggcgagcggaaacccgtacggcatgatcaccgta
gaggacttcaacggtgaggtcaccgtgatgttcatgggaaagacctacaccgagttccag
cacacgctgcagcaggacgcgatcctcgccgtgcgcgggcgcgtgtccaggcgcgacgac
gggctcaacctgcacgcgcagtcggcgttcgctcccgacgtaggctctttcgacgccgcc
ggtccgctggcactcgtcctcgccgagcagcgggcgaccgagcgggtgatgatggaactc
gcggaggtgctccggcgccacaacggagacaccgaggtggtgctccgcgtgcaccggggc
ggcacggcgaaggtcttcgaggtgccgatgcccgtcaaggtgtccgcggatctgttcggt
gacctcaagtcgctgctcgggcccacctgtctggggtga
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integrated database retrieval system
