Microbacterium oxydans: CVS54_02037
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Entry
CVS54_02037 CDS
T06672
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
moy
Microbacterium oxydans
Pathway
moy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVS54_02037 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moy03400
]
CVS54_02037 (fpg1)
Enzymes [BR:
moy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CVS54_02037 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CVS54_02037 (fpg1)
DNA repair and recombination proteins [BR:
moy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVS54_02037 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
NFACT_N
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AZS40698
UniProt:
A0A3S9WKU4
LinkDB
All DBs
Position
complement(2074626..2075492)
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEVVRAGLAPAVIGSTITAVSVFDERALTRHVAGAADFVARLEGRIFTDASRRG
KFLWLPLDDEDSALIGHLGMSGQMLLRAPDAGAERHERVRIGIEHPRHGELAIVFADQRT
FGSLAVDALIDDGGSRIPTQVAHIARDPLDPAFDDRGFRATLGRRGSAIKRVLLDQGVVS
GIGNIYADESLWAARIHPETPADRLSTQAVRRLLAEVRLVLAKALAEGGTSFDAQYVNVN
GQAGYFAHSLNAYGQQGKPCPRCGTPIVRESFMNRGSHFCPRCQRLPR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcttcccgaggtcgaggtcgtccgcgcaggcctcgcaccggccgtgatcgga
tcgaccatcaccgcggtgagcgtgttcgacgagcgcgccctcactcgtcacgtggccggt
gccgctgacttcgtcgctcgcctcgagggacgcattttcaccgacgcatcgcgccgcggg
aagttcctgtggctgccgctcgatgacgaggattctgcgctgatcgggcatctcggaatg
agcggtcagatgctgttgcgcgcgcccgacgcgggggccgaacgacatgagcgggtgcgg
atcggaatcgagcatccccggcacggcgagctcgcgatcgtcttcgccgatcagcggacc
ttcggatccctcgccgtcgatgcgctgatcgacgacggcggatcgcggatcccgactcag
gtggcgcacatcgctcgtgaccccctggatccggcattcgacgaccgtggctttcgagca
actctggggcgacgggggagtgcgatcaagcgtgttctcctcgatcagggtgtcgtgagc
gggatcggcaacatctacgcagacgagtcgctgtgggcagcgcggatacaccccgagacg
ccggccgatcgtctgtcgacgcaggccgtccgcaggctgctcgccgaggtccggctcgtg
ctcgcgaaagccctcgccgagggcggaaccagcttcgatgcgcagtacgtcaacgtcaac
ggccaagccggctatttcgcgcactcgctcaacgcctacgggcagcagggcaagccctgc
ccgcggtgcggaacgcccatcgtgcgcgagagcttcatgaaccggggctctcacttctgc
ccgcgctgccagcggctgccgagatag
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