KEGG   Microbacterium oxydans: CVS54_02134
Entry
CVS54_02134       CDS       T06672                                 
Symbol
rnj
Name
(GenBank) Ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
moy  Microbacterium oxydans
Pathway
moy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:moy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CVS54_02134 (rnj)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:moy03019]
    CVS54_02134 (rnj)
Messenger RNA biogenesis [BR:moy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CVS54_02134 (rnj)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 YicC-like_C
Other DBs
NCBI-ProteinID: AZS40790
UniProt: A0A3Q9J661
LinkDB
Position
complement(2177485..2179161)
AA seq 558 aa
MSIPLVEPTALDEGTLRVIPIGGLGEIGRNMTMFEYDGKILIVDCGVLFPEEHQPGVDLI
LPDFEPIRDRLEDIVGVVLTHGHEDHIGAVPYLLRLKSDIPLIGSGLTLALVEAKLKEHR
IKAFTLTVKEGQEERVGPFDLEFVAVNHSIPDALAVAIRTPAGMVLATGDFKMDQLPLDG
RITDLRAFARLGEEGVDLFLVDSTNADVPGFTPTERSIGPVLDQVIAKAPRRVIVASFSS
HVHRVQQVIDAAHANGRRVAFLGRSMVRNMTIAEQLGYLKVPDGVLIDFKKARDLPDEQI
VYMSTGSQGEPMAVLSRMANMDHAIEISEGDTVILASSLIPGNENAVYRVIDGLTKLGAN
VVHKANAKVHVSGHAAAGELIYCYNILKPKNVLPVHGEYRHLIANAKLAQDTGVPEDNTI
IASNGTVIDLKGGVAKVAGQLDLGFVYVDGSTVGEITDADLKDRRILGEEGFISVIVVVD
ATTGRIISGPEIHARGVAEDDSVFDDVTPKIVAALKEASGNGVRDTHALSQVVRRTIGRW
VNQRLRRRPMIVPLVIEA
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgtccattcccctggtagaaccgaccgctctcgatgaagggacgctgcgggtcatcccg
atcggcgggctcggagagatcggtcgcaacatgaccatgttcgagtacgacgggaagatc
ctgatcgtcgactgcggtgtgctcttcccggaggagcaccagccgggcgtcgacctgatc
ctcccggacttcgagcccatccgtgatcgcctcgaagacatcgtcggtgtcgtgctcacg
cacggccacgaagatcacatcggcgccgtgccctacctcctgcgcctgaagagcgacatc
cctctgatcggctccgggctcaccctcgcgctggtcgaggcgaagctcaaggagcaccgc
atcaaggccttcaccctcaccgtgaaggaggggcaggaggagcgggtcggtccgttcgac
ctggagttcgtcgcggtcaaccactccatccccgacgcgctggccgtcgccatccgcacc
cccgccggcatggtcctcgcgaccggcgacttcaagatggaccagcttcccctcgacggc
cggatcaccgacctgcgcgcgttcgcccgcctcggggaagagggcgtcgatctgttcctc
gtcgattcgaccaacgccgacgttcccggcttcaccccgacggaacgctccatcggcccc
gtgctcgatcaggtgatcgcgaaggcgccgcgtcgcgtcatcgtcgccagcttctccagc
cacgtccaccgtgtgcagcaggtcatcgatgccgcacacgccaacgggcgccgcgtcgcg
ttcctcggccgcagcatggtccggaacatgacgatcgccgagcagctcggctacctgaag
gtgccggacggcgtcctgatcgacttcaagaaggcacgtgatctgcccgacgagcagatc
gtctacatgtcgacgggctcgcagggagagccgatggccgtgctcagccggatggcgaac
atggatcacgcgatcgagatcagcgagggcgacaccgtcatcctcgcctccagcctcatc
ccgggcaacgagaacgcggtgtaccgcgtgatcgacggcttgaccaagctgggcgccaac
gtcgtgcacaaggcgaacgcgaaggtgcacgtctccgggcacgccgccgcgggtgagctc
atctactgctacaacatcctgaagccgaagaatgtcctcccggtccatggcgagtaccgc
cacctcatcgcgaacgccaagctggcgcaggacaccggcgtgccggaggacaacacgatc
atcgcctcgaacggcaccgtgatcgacctcaagggcggggtcgcgaaggtcgcaggtcag
ctcgatctcgggttcgtgtacgtcgacggctcaaccgtcggcgagatcacggacgccgac
ctcaaggaccgccggatcctcggcgaggagggcttcatctcggtcatcgtcgtggtggac
gccacgaccgggcgcatcatctcgggcccggagatccatgcgcgcggcgtcgccgaggac
gactccgtgttcgacgacgtcacgcccaagatcgtcgccgcgctcaaggaggcgtccggc
aatggtgtccgtgacacccatgcgctgtcgcaggtcgtgcgacgcacgatcggtcgctgg
gtcaatcagcggcttcgtcgtcgccccatgatcgtgccgctcgtcatcgaggcgtga

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