Microbacterium oxydans: CVS54_02193
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Entry
CVS54_02193 CDS
T06672
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
moy
Microbacterium oxydans
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
moy03016
]
CVS54_02193 (truB)
Enzymes [BR:
moy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CVS54_02193 (truB)
Transfer RNA biogenesis [BR:
moy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CVS54_02193 (truB)
Prokaryotic type
CVS54_02193 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AZS40849
UniProt:
A0A3S9WLA1
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All DBs
Position
complement(2237144..2238037)
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AA seq
297 aa
AA seq
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MVSPGILLVDKPAGLTSHDVVARTRRAFGTRKVGHAGTLDPMATGLLVIGIEGATRLLTY
IVGADKTYTATIRLGQTTGTDDAEGEILTTASADAWASVTDDAVSAGIAELTGEISQVPS
AVSAIKVDGRRAYDRVRAGEEVVLAARDVVISRFDLLATRRGEGHVDLDVIVECSSGTYI
RSLARDLGAGLGVGGHLTALRRTRVGPFDVTEAVGLDALEGAPTLTPGEAAARILPVLEM
SSDDARDLRHGKRLSGQAARLHEAMGAAIDQDGALIGIVEKRGADLKSAMNMPEVVP
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgcccggcatcctcctcgtcgacaaacccgctgggctgaccagtcacgacgtg
gtcgcccgcacgcggcgggcgttcggcacccgcaaggtggggcatgccggaaccctcgac
ccgatggcgacgggtctgctggtgatcggcatcgaaggggcgaccaggctcctgacgtac
atcgtgggtgccgacaagacctacacggcgacgatccgtctcggccagaccaccggcacc
gacgatgcggagggggagatcctcacgacggcctccgccgatgcctgggcctcggtcacc
gacgacgcagtgtcggccggcatcgccgagctcacgggggagatctcccaggtccccagt
gccgtctcggcgatcaaggtggacggtcgccgtgcctacgatcgggtgcgcgcgggagaa
gaggtcgtactcgcggcacgggacgtcgtgatctcgcggttcgacctgctggccactcgc
cgcggagaggggcacgtcgatctcgatgtcatcgtcgagtgctcgtccgggacctacatc
cgctccctcgcccgagacctcggggcgggcctcggcgtcggcggtcatctgacggcactg
cggcgcacgagggtcgggccgttcgatgtgaccgaggccgtcgggctcgatgcactcgag
ggcgcgccgaccttgactccgggcgaagcagcggcgcggatcctgcccgtgctcgagatg
tcctccgacgacgcgcgcgacctccgccacggcaagcgattgagcggacaggctgcacgt
ctgcacgaggcgatgggcgcggcgatcgaccaggacggtgccctgatcggcatcgtcgag
aagcgcggcgcggatctcaagagcgccatgaacatgccggaggtcgtaccatga
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