Microbacterium oxydans: CVS54_02247
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Entry
CVS54_02247 CDS
T06672
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
moy
Microbacterium oxydans
Pathway
moy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVS54_02247 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
moy03021
]
CVS54_02247 (rho)
03019 Messenger RNA biogenesis [BR:
moy03019
]
CVS54_02247 (rho)
Transcription machinery [BR:
moy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CVS54_02247 (rho)
Messenger RNA biogenesis [BR:
moy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CVS54_02247 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
ATPase_2
AAA_22
VWA_2
Motif
Other DBs
NCBI-ProteinID:
AZS40903
UniProt:
A0A3S9WLM3
LinkDB
All DBs
Position
complement(2294971..2296917)
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AA seq
648 aa
AA seq
DB search
MTYKGVLVENLSETQNEQSAPASEAPATSAEPTGEAAPARKRAPRRASTATAAAKAEKAE
KADAAKAEKAAKSDAAPEASVPAEASATAAASATAETTEAAPKAKRPSRSRAKKADAEAP
SAETAPAEASDSAGAEAPAEAAPKSMGRGRRGAQKPAADAEAPAAEPAAESAAESAPAEA
PQNADSDSGDSGEEQGGRGRNRSRSRNRGRGQNGAAQEQQQTQPAADDEQSGGNNRNRQR
NKRRNGAPADEFETEITEDDVLIPIAGILDVLDNYAFVRTTGYLAGPSDVYVSLGQVKKY
NLRKGDAVVGSIKQPREGEQQGRQKYNALVKVDSINGLSVDDAATRVEFGKLTPLYPQER
LRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIAQNNPEVHLMVV
LVDERPEEVTDMERTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSI
TRLGRAYNLAAPASGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKM
DEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSADEVKITWKLRRAL
AGLDPQQALEVVLGKLKETNSNVEFLVQMQKSIPTLPSGAHGHDNNIR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacatataagggagtactcgtggagaacctctccgagacccagaacgaacagtctgcg
cccgcttcggaagcaccggcgacatccgcggagccgacgggcgaagcagcaccggcgcgc
aagcgtgcgcctcgccgtgccagcaccgcgaccgcggctgcgaaggccgagaaggcggag
aaggccgatgccgcgaaggcggagaaggccgcgaagtcggacgccgctccggaagcgtcc
gtgcccgcggaagcgtccgccaccgcagcagcgtccgccactgcagagaccaccgaggct
gcaccgaaggcgaagcgtccgagtcgcagccgtgcgaagaaggccgatgccgaggctcct
tccgcggagacggcgcccgccgaggcctccgactccgctggcgccgaggctcccgccgag
gccgcgcccaagagcatgggacgcggacgccgcggtgcgcagaagcccgcagccgacgcc
gaggcgcccgctgcggagccggcagcggagtccgctgccgaatcggcacccgctgaggct
ccgcagaacgccgactccgactccggggacagcggcgaggagcagggcggtcgcggacgc
aaccgcagccgcagccgcaaccgcggacgcggtcagaacggcgcggcccaggagcagcag
cagacgcagcccgccgccgacgacgagcagtccggtggcaacaaccgcaaccgtcagcgc
aacaagcgccgcaacggtgcaccggccgacgagttcgagaccgagatcaccgaggacgac
gtcctgatcccgatcgccggcatcctcgacgtgctcgacaactacgctttcgtgcgcacc
accggctacctcgccggtcccagcgacgtctacgtctcgctcggccaggtgaagaagtac
aacctccgcaagggcgacgcggtcgtcggctccatcaagcagccgcgcgagggcgagcag
caggggcgccagaagtacaacgccctggtcaaggtcgattcgatcaacggcctgtcggtc
gacgacgcggccacccgcgtggagttcggcaagctcaccccgctctacccgcaggagcgt
ctgcgtctggagacggccccggagaagctgacgcagcgcatcatcgacctcgtggcgccg
atcggaaagggccagcgcggactgatcgtcgcgccgccgaaggccggcaagacgatcgtc
ctccagcagatcgccaacgcgatcgcgcagaacaatcccgaggtccacctcatggtcgtg
ctcgtcgacgagcgccccgaagaggtcaccgacatggagcgcaccgtgaagggcgaggtc
atcgcctcgaccttcgaccgccccgccgaagaccacaccaccgtcgccgagctcgcgatc
gagcgggccaagcgtctcgtcgagctgggccgcgatgtggtcgtgctcctcgactcgatc
acccgcctcggacgcgcgtacaacctggccgccccggcgtccggccgcgtcctcaccggc
ggcgtcgacgcgtccgcgctctacccgccgaagcgcttcttcggtgcagcccgcaacatc
gagaacggcggatccctgacgatcctcgccaccgcgctcgtcgagaccggctccaagatg
gacgaggtcatcttcgaggagttcaagggcaccggcaacagcgaactgcgtctgtcgcgt
cagctcgccgacaagcggatcttcccggccgtggacgtgaacgcgtccagcacccgccgc
gaggagatgctgctctcggccgacgaggtcaagatcacgtggaagctccgtcgcgccctc
gccggactcgacccgcagcaggcgctcgaggtcgtgctcggcaagctcaaggagaccaac
tcgaacgtcgagttcctcgtgcagatgcagaagtcgatcccgacgctgccctcgggcgct
cacggacacgacaacaacatccgctga
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