Microbacterium oxydans: CVS54_02289
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Entry
CVS54_02289 CDS
T06672
Symbol
ddpA_3
Name
(GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
moy
Microbacterium oxydans
Pathway
moy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVS54_02289 (ddpA_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
moy02000
]
CVS54_02289 (ddpA_3)
Transporters [BR:
moy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CVS54_02289 (ddpA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AZS40944
UniProt:
A0A147E334
LinkDB
All DBs
Position
2339422..2340942
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AA seq
506 aa
AA seq
DB search
MFRRTRRLALISALAATAVILSACSGTTEPETSSSPGAPDPSATLHVGLVLEPTNLDIRH
TSGAALEQILIDNIYEGLVTRTQDNEIEGRLASDYEVSSDGLTYTFTLNDGVVFHDGTPL
TSADVVSSYETVRTDATVQGNADFASVTAITAPDPTTVQITLSAPNQNFLFALTGPAGLV
FKTGDTTDLKTAENGTGPFTLTRWNKGSTITFARNDAYWGDPAGVAQVEFQYIPDFTAGV
NAALAGDVDVLTAVDPNLAPQLEDSGDFTLTTGRTTDKATLAFNNKKAPLDDVRVREALR
LAIDHEALIDAVGAGTALYGPIPELDPGYEDLSDVISYDPEKAKKLLAEAGQEDLELTLT
IPSFYGTTVPKVLISDFKKVGVTLEVNSVEFPTWLEDVYTNHDYDLSFVLHVEPRDFGNF
ANPDYYFGYDNAEVQDLYTKALAEVDPDKSADLLAQAARIVSEDHAADWLYNGETITAVS
PIVSGFPEDSINSRINLTGVTVSAEK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgttccgacgtacccgacgtctcgcgctgatatccgccctcgcggccaccgccgtcatc
ctcagcgcctgctccggcaccaccgagccggagaccagcagctcacccggtgcccccgac
ccgagcgccactctccacgtcggcctcgtcctcgagcccaccaacctcgacatccgccac
accagcggcgccgcactcgagcagatcctgatcgacaacatctacgagggcctcgtcacg
cgcacgcaggacaacgagatcgaggggcgtctcgcctccgactacgaggtctcctcggac
gggctcacatacaccttcaccctcaacgacggcgtggtcttccacgacggcacgccgctg
acgtcggcggacgtcgtctcctcgtacgagaccgtgcgcacggacgccaccgtgcagggc
aacgcggacttcgcgtcggtcacagcgatcacggcgccggacccgaccacggttcagatc
accctgtccgctccgaaccagaacttcctcttcgcgctcaccggcccggccggtctcgtg
ttcaagaccggcgacaccaccgatctgaagaccgcggagaacggcacaggtcccttcacg
ctgacgcgctggaacaagggaagcaccatcaccttcgcgcgcaacgacgcctactggggg
gatcctgccggcgtcgcccaggtcgagttccagtacatccccgacttcaccgccggcgtc
aacgccgcactggccggcgacgtcgacgtgctcacggccgtcgacccgaacctcgcgcct
cagctcgaagactccggggacttcaccctcaccacggggcgcaccaccgacaaggccact
ctcgcgttcaacaacaagaaggcgccgctcgacgacgtgcgggtgcgcgaagccctgcgc
ctcgccatcgaccatgaggctctcatcgacgcggtcggcgccggcacggcactgtacggg
cccatccccgaactcgacccgggctacgaggacctgtccgacgtgatctcctacgacccg
gagaaggcgaagaagctcctcgctgaggctggtcaggaggacctcgagctgaccctcacg
atcccctcgttctacggcacgaccgtgcccaaggtgctgatctcggacttcaagaaggtc
ggcgtgacgctcgaggtgaactcggtcgagttccccacctggctggaggacgtgtacacg
aaccacgactacgacctcagcttcgtgctgcacgtcgagccgcgcgacttcggcaacttc
gccaaccccgactactacttcggctacgacaacgccgaggtgcaggatctgtacacgaag
gctctggccgaggtcgaccccgacaagtccgccgacctgctggcacaggcagcgcgcatc
gtctcggaagaccacgccgccgattggctctacaacggagagacgatcaccgccgtgagc
cccatcgtgtcgggcttccccgaagactcgatcaactcccgcatcaacctcacgggcgtc
accgtctccgctgagaagtag
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