Microbacterium oxydans: CVS54_02435
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Entry
CVS54_02435 CDS
T06672
Symbol
uvrD_1
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
moy
Microbacterium oxydans
Pathway
moy03420
Nucleotide excision repair
moy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVS54_02435 (uvrD_1)
03430 Mismatch repair
CVS54_02435 (uvrD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moy03400
]
CVS54_02435 (uvrD_1)
Enzymes [BR:
moy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVS54_02435 (uvrD_1)
DNA repair and recombination proteins [BR:
moy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVS54_02435 (uvrD_1)
MMR (mismatch excision repair)
Other MMR factors
CVS54_02435 (uvrD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AZS41089
UniProt:
A0A3S9WLZ3
LinkDB
All DBs
Position
complement(2504312..2507836)
Genome browser
AA seq
1174 aa
AA seq
DB search
MTGENGARWSVGVSISATDIAAALGQPSPTPAQQRVIEAPPEPALVVAGAGSGKTETMSG
RVVWLVANGHVRRDEILGLTFTRKAAGELAERIGHRLAVIDEYGRRGLLPHLPAIVADGS
LRRVEEAAPGRQREVVRAHVLDELAAQRGTGWDPVIPRAAEDLMIRPRVSTYNAFADGIV
REHAARIGRDPDVAMLRQAASWMLAREVVLRSDLPELENIDFALGTVIDAVQRLAGDALD
HRVDLDLAERIAREQALAFEPYRSNGDVEKAAVNLLSLPTLSSLVRDYIAEKHRRGVLDF
ADQVGGAYDIVESAPDVRAELREQHRVVLLDEYQDTSVIQTRFLAELFRDSAVMAVGDPH
QSIYGWRGASADNLYAFSGTFSSTGAAHTYSLMTSWRNDRRILGIANRVLEPLQRPGLDV
PPLEPRPGAGEGTVTVEYPFTVDEEAAAVAEWFSERRAAHDARDTAAAHATKPHTGAIVF
RSKRHMQTFAAALAARGIPHRILGLGGLLATPEVVDVVSTLRVVHDPTAGSALIRLLTGP
RFGVGVADMAALYDLGRTLSERDPAMAPLPEEIRSRLRGSRGADEAVSIIDAVDVVRAVR
DDYRLLEAITPDGRARVRAAGEMLERLRRASSQPIPELIRLIELELRLDIELAANETRGP
ARIAATQLRAFSDEVRAFLAADDRGSIGSLLAWLDKAESTDELMPRPEPPEPGVVQLLTI
HGSKGLEWDAVAVVRLVVDELPSRVSDASGWFGFGVVPFALRGDRDALPRFEWDPVGAMG
DETDPVKRQKLAQASLSGGATKANPQGGAIKRFKDAYRAYQQQEERRLAYVAVTRARTDL
LLSGSHWAGQKSPRTPSPYLLEAIEAQGFEEIDQVDPDDNPYEGPGSTLRWPLDPLGARR
GVVSAAAAAVEEATLRGTAEPSIELARLLAERAARQRGADAEAPTRVPASRFKDYVTDFS
GTLSSIVRPMPERPYRQTRLGTLFHAWVEQRSELVGVGSRVDEALWELDEEEAPIEAEHL
TRASGEGRGTTADAADLAVLQATFERSEWGGLQPIAVEIEIDFVLGAGLSADEAAGGHIV
ICKLDAVYRRADRGGRVEIVDWKTGKAPRTAAEREERMLQLALYRLAYHRRFDVPLEEID
VALYYVADDLIIRDDRIYSEEELFQRWSAARAAR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggggagaacggcgcacggtggagcgtcggcgtctcgatctccgcgaccgacatc
gccgccgcgctgggccagccttcgccgacccccgcccaacagcgtgtgatcgaggcgccc
ccggaacctgcgctcgtggtcgcgggtgccggcagcgggaagaccgagacgatgtcgggg
cgcgtcgtgtggctcgtcgccaacgggcacgtgcgccgcgacgagatcctcggcctcacc
ttcacgcgcaaggctgcgggtgagctcgcggagcggatcggccatcggctcgcggtcatc
gacgagtacggtcgtcgtggactcctgccccatctcccggcgatcgtggcggacggatca
ctgcgcagggtggaggaggcggcgcccggccgccagcgcgaggtggtccgtgcacacgtg
ctcgacgagctcgccgcccagcgcgggaccgggtgggacccggtgatccctcgggcggcg
gaggacctgatgatccggcctcgggtctcgacctacaacgccttcgcggacggcatcgtc
cgcgagcacgctgcacgcatcgggcgagaccccgacgtggcgatgctcagacaggcggcc
tcctggatgctcgcgcgcgaggtcgtgctgcgtagcgatctccctgagctggagaacatc
gacttcgcgctcggcacggtcatcgatgcggtgcagcggctcgccggagacgccctcgac
caccgtgtggacctggatctcgccgagcgcatcgcccgggagcaggccctcgccttcgag
ccctatcggagcaacggcgatgtcgagaaggcggccgtgaacctgctcagtcttccgacg
ctgtcgagcctggtgcgcgactacatcgcggagaagcatcgtcgcggcgtgctcgacttc
gccgatcaggtcggcggcgcatacgacatcgtcgagtcggcgcccgatgtgcgcgccgag
ctccgcgagcagcatcgcgtggtgctgctcgacgagtatcaggacacgtcggtcatccag
acccgcttcctcgcggagctcttccgtgactcggcggtgatggccgtgggcgacccgcac
cagtcgatctacggctggcgaggggcgagcgccgacaatctttacgcgttctccggcacg
ttctcgagcacgggcgcggcgcatacctacagcctcatgaccagctggcgcaacgaccgc
cgtatcctcgggatcgcgaaccgggtgctcgaaccgctccagcggcccgggctcgacgtg
cccccgctcgaaccccgtcctggggcgggagagggcaccgtgaccgtggagtaccccttc
acggtcgacgaggaggcagcagccgtggcggagtggttctccgagcgtcgagcggcacac
gatgcccgcgacacggcagcggcacacgcgacgaagccgcacaccggcgcgatcgtgttc
cgctcgaagcggcacatgcagacgttcgcggctgcgcttgcagcccgggggatcccgcat
cggatcctcggtctcggcggactgctggcgacgccggaggtcgtcgacgtcgtctcgacg
ctccgcgtggtgcacgaccccacggcgggatcggcgctcatccgactgctcaccgggccg
cgattcggcgtgggggtggccgacatggcggcgctctacgacctcgggcgcacgctctcg
gagcgtgaccccgcgatggctccgctgcctgaggagatccgttcgcggctgcgcgggtcg
cggggcgccgacgaggcggtgtcgatcatcgacgccgtcgacgtggtcagggccgtgcgc
gacgactacagactgctcgaagcgatcaccccggacgggcgggcacgcgtgcgcgccgcg
ggcgagatgctggagcgtctgcgacgagcgtcctcgcagccgatcccggagctgatccgc
ctgatcgagctcgaactgcggttggacatcgagttggcggcgaacgagaccagagggcct
gcccggatcgccgcgacgcagctgcgcgcgttctccgacgaggtcagggccttcctcgcc
gccgacgaccgggggagcatcggcagcctgctggcctggctcgacaaggcggagagcacg
gacgagctcatgcctcggccggaaccgccggaacccggcgtcgtgcagctgctgacgatc
cacggctcgaagggcctggagtgggatgccgtcgcggtcgtccgactcgtggtcgacgag
cttccgagccgtgtctccgacgcctcagggtggttcgggttcggcgtcgtccccttcgct
ctgcgcggcgaccgagatgcgctgccccgcttcgagtgggaccccgtcggggcgatgggc
gacgagaccgaccccgtcaagcgtcagaagctcgcgcaggcgtcgctctccggcggcgcg
accaaggcgaatccgcaggggggcgcgatcaagcgcttcaaagacgcgtaccgggcgtat
cagcagcaggaagagcgacgtctggcgtatgtcgcggtcacccgtgcgcggaccgatctg
ctcttgagcggctcccactgggcggggcagaagtccccgcgcacgccgagtccctatctg
ctcgaagccatcgaggcgcaggggttcgaggaaatcgatcaggtcgatccggacgacaat
ccgtatgagggccccggttccacgctccgctggcccctcgacccgctgggcgctcggcgg
ggtgtcgtgtccgcagcggcagcggctgtcgaagaggccacgctccggggaacggcagaa
ccctcgatcgagctcgctcgtctgctcgccgagcgtgcggccagacagcgcggtgccgat
gcggaagcgccgacgcgcgtgccggcctcgaggttcaaggactatgtcaccgacttctcc
ggaaccctctcgtcgatcgtcaggccgatgccggagcggccctaccggcagacccgcctc
ggcacgctgttccacgcctgggtggagcagcggtccgagctcgtgggcgtcggcagccgt
gtggatgaggcgctctgggagctcgatgaggaggaggcgccgatcgaggccgagcacctg
acgagggcgtcgggggaggggcgcggaacgaccgccgacgccgccgacctcgccgtgctg
caggcgacgttcgagcgcagcgagtggggaggattgcagcccatcgccgtcgagatcgag
atcgacttcgtgctcggtgcaggcctctccgcggacgaggctgcggggggtcacatcgtc
atctgcaagctcgatgccgtgtaccggcgcgccgaccgcggcggccgcgtcgagatcgtc
gactggaagaccggcaaggccccgcgcaccgccgccgagcgggaggagcgcatgctgcag
ctcgcgctctaccgtctcgcgtaccaccgcagattcgacgtaccgctggaggagatcgat
gtcgcgctgtactacgtggccgacgacctgatcatccgcgacgatcggatctactcggag
gaagagctcttccaacgctggagtgccgctcgcgcggcgcgctga
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