Methylogaea oryzae: MoryE10_03770
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Entry
MoryE10_03770 CDS
T07433
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
moz
Methylogaea oryzae
Pathway
moz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
moz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MoryE10_03770 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
moz03021
]
MoryE10_03770 (rpoC)
03400 DNA repair and recombination proteins [BR:
moz03400
]
MoryE10_03770 (rpoC)
Enzymes [BR:
moz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MoryE10_03770 (rpoC)
Transcription machinery [BR:
moz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MoryE10_03770 (rpoC)
DNA repair and recombination proteins [BR:
moz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MoryE10_03770 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
BBL69771
UniProt:
A0A8D4VLH5
LinkDB
All DBs
Position
384957..389171
Genome browser
AA seq
1404 aa
AA seq
DB search
MKDLINFLKRQGQVEEFDAIRIGLASPDTIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVSDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIDLASPVAHIWFLKSL
PSRIALLLDLTLREIERVLYFESFLVIDPGSTPLQRGQLLSEDEYNEAVEQYGDEMTATM
GAEAIYAMLKTMDLPQEIARLREDVAGTSSETKIRKLTKRQKAIESLLSSNNRPEWMIPT
VLPILPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKKMALELFKPFIFSKLQLRGLATTIKAAKKMVERESAEVWDILDEVIRQHP
ILLNRAPTLHRLGIQAFEPMLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQMEA
RTLMMATNNILSPANGEPIINPTQDVVLGLYYMSRESINATGEGMIFSNVDEVQIAYLNK
VVDLQAKVQVRITETVVDADGNSTTETRREQTTVGRAIIWTIVPPGLPFEMVNQDMTKKA
ISKLINTAYRLLGIKVSVVLADQLMYMGFRYATIAGVSIGFEDMVIPAKKVDIIQAADRE
VKEIQSQYSSGLVTDGERYNKVVDIWSHANDQVAKAMMDTLGTDFVLDAEGKQAAQKSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLDVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVITELDCGTEEGLVMNPLIEGGDVVEPLAERVL
GRVAAEDILDPASKELVAPAGTLLDEHWVGVLEQHSVDSVTVRSVISCKTRYGVCAACYG
RDLGRGHLVNIGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRSAAISNVEVKSTGTIRL
TNLKTVRNKEGNLVAVSRSGEVSVIDEHGRERERYKIPYGAVLTVDEGSRVKAGEIVVNW
DPHTHPVITEVNGRAQLTDFIDGVTVRQHTDEVTGLSSLVVIDPKQRGAAGKDLRPMVKL
VDESGNEINIPGTEIPAQYFLPSGAVINARDGGMVEVGDVLARIPQESSKTRDITGGLPR
VADLFEARKTKDPAILAEATGTVSFGKETKGKRRVIITDVQGQQHEALIPKWRHVTVFEG
EHVTQGETIAEGELTPHDIVRLRGVTELAAYLVKEIQDVYRLQGVRINDKHIEVIIRQML
RKVEITSTGDSSYLIGEQAEKSRVLEENERLVAEGKIPACYEPVLLGITKASLSTESFIS
AASFQETTRVLTESAIRGAVDRLHGLKENVIVGRLIPAGSGSAYHQERKRKRKLLEEVEA
EAVSSGVDMVEAEEALKQALSGED
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttgattaactttctgaaaagacagggtcaggttgaagagttcgatgcgatt
cgtatcggcttggcttcgcccgacaccattcgctcctggtccttcggcgaagtgaaaaag
ccggaaaccatcaattatcgtaccttcaagccggagcgcgacggcttgttctgcgccaag
atattcggcccggttagcgactacgaatgcttgtgcggaaaatataagcgcctcaagcat
cgcggcgttatctgcgaaaagtgcggcgtcgaggtgaccttgtccaaggtgcgccgcgaa
cgcatgggccacatcgatctggccagccccgtcgcgcatatctggttccttaagtcgctg
ccgtcccgtatcgcgcttttgttggaccttaccttgcgcgaaattgagcgggtgctgtac
ttcgaatcgttcctcgtgatcgatccgggcagtacgccgttgcagcgtggccagttgctc
agcgaagacgagtacaacgaggctgtcgaacagtacggcgatgaaatgaccgcgaccatg
ggagccgaggcgatttacgccatgctgaagaccatggatctgccgcaggaaatcgccaga
ttgcgcgaagacgtcgcgggaaccagctcggaaaccaaaatccgcaagctcaccaagcgg
cagaaggccatcgaatcgttgttgtcctccaataatcgtccggaatggatgattcccacg
gtattgccgattctgccgccggacttgcggccgttggttccgttggacggcggccgtttc
gctacctcggatctcaacgatttgtatcgccgcgtcatcaaccgcaacaaccgtttgaag
cggttgctggatttgaatgcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gagtcggtcgacgcgctgttggacaacggccgccgcggtcgcgccattaccgggtcgaac
aagcgcccgcttaagtctttggccgacatgatcaaaggcaagcagggacgtttccgccag
aacctgttgggcaagcgcgtcgattattccggccgttccgtgatcgtggtcggtccgacc
cttaagctgcaccaatgcggcctgccgaaaaaaatggccttggaactgttcaagccgttt
attttcagcaagctgcaattgcgcggcttggccaccacaatcaaagccgccaagaagatg
gtcgagcgggaaagcgcggaggtgtgggatatcttggacgaagtcattcgccagcatccc
atcctgctgaaccgtgcgccgacgctgcaccgtttgggcattcaggcgttcgagccgatg
ctgatcgaaggcaaggcgattcagttgcacccgttggtgtgtaccgcgttcaacgccgac
ttcgacggcgaccagatggccgtccacgtaccgttgtccatcgaggcgcaaatggaggcg
cgcaccttgatgatggcgaccaacaacatcctgtcgcccgccaacggcgagccgatcatc
aacccgacccaggacgtggtgttggggctctattacatgagccgcgaatccatcaacgcc
accggcgaaggcatgatcttcagcaacgtcgacgaggtgcagatcgcttacctgaataag
gtggtggatttgcaggcgaaggtccaggtgcgcatcacagagacggtcgtcgacgccgac
ggcaacagcactacggaaacccgccgcgaacagaccaccgtgggccgcgccatcatttgg
acgatcgtgccgccggggttgccgttcgaaatggtcaaccaggatatgaccaagaaggca
atttctaagctgatcaataccgcttatcgcctgctgggcatcaaagtctcggtggtgctg
gccgaccagttgatgtacatggggttccgctacgcgaccatcgccggcgtgtctatcggt
ttcgaggacatggtaatccccgccaaaaaggtggacatcatccaagcggccgatcgcgag
gtgaaggaaattcagagccagtattcgtcgggtctagtgaccgacggcgagcgttacaac
aaagtggtggatatttggtcgcatgccaatgaccaagtggccaaggccatgatggacacg
ctcggcacggatttcgtgctcgacgccgaaggcaagcaagcggcgcagaagtcgttcaat
tccatctacatgatggccgactccggggctcgaggctccgctgcgcagattcgacagctg
gccggtatgcgcggcctgatggccaagcctgacggctccatcatcgaaacgccgatcact
gcgaatttccgcgaaggattggacgtactgcagtacttcatttccactcacggtgctcgt
aagggcctcgcggatacggcgttgaagaccgccaactccggctacctgacgcgccgccta
gtggacgtggcccaggatctggtgattaccgaactggattgcggcaccgaggaaggtttg
gtgatgaatccgctgatcgaaggcggcgacgtggtcgaaccgctggctgagcgggtgctc
ggtcgcgtagcggcggaggatattctcgatccggcctccaaggaattggtggctcccgcc
ggtacgttgctcgatgagcattgggtcggcgtgttggaacaacacagcgtcgacagcgtc
acggtgcgttcggtaattagctgcaaaacccgctacggcgtgtgcgcggcgtgttacggc
cgcgatttgggacgtgggcatttggtcaacatcggcgaagcgatcggcgttatcgccgct
cagtccatcggtgagccgggtacccagttgaccatgcgtaccttccacattgggggcgcg
gcgtcccgttccgctgccatcagcaacgtggaggtcaagtcgaccggcaccatccgtttg
actaacctgaaaacggtgcgcaacaaagaaggcaacttggttgccgtctcgcgttcgggc
gaggttagcgtgatcgacgagcatggccgtgagcgcgagcgctacaagattccttacggc
gcggtcttgaccgtggacgaagggagccgcgtcaaggccggcgagatcgtggtgaattgg
gatccccatactcacccggttatcaccgaagttaacggtcgcgcgcagttgacggatttc
atcgacggcgtaaccgttcgtcagcacaccgacgaagtgaccggcttgagctcgctggtg
gtcatcgatcccaagcagcgcggcgcagccggcaaagacttgcggccgatggtgaagctg
gtggacgaatcgggcaacgaaatcaatattccgggcaccgaaattccggcgcagtatttc
ctgccgtccggtgccgtgatcaacgctcgcgacggcggcatggtggaagtgggcgacgta
ttggcgcgtattccgcaagaatcgtcgaaaacccgtgacatcactggcggtctgccgcgc
gtggccgacttgttcgaggcgcgtaaaaccaaggatccggcgatcctggcggaagcgacg
ggtacggttagcttcggcaaggaaaccaaaggcaagcgccgcgtcatcatcaccgatgtc
caggggcaacagcacgaagcgctgattcccaagtggcgtcacgtcaccgtgttcgaaggc
gagcacgtgactcagggcgaaacgatcgccgaaggcgagttgacgccccacgatatcgtg
cgtctgcgcggcgtaacggagttggcggcttacctggtcaaggaaatccaggacgtttat
cgtcttcagggtgtgcgtatcaacgataagcacatcgaagtaatcatccggcaaatgctg
cgcaaggtggagatcacgtctaccggcgacagtagctacctcatcggcgaacaagccgag
aagtcgcgggtgctggaggagaacgagcgcctcgtcgccgaaggcaagattccggcttgt
tacgagccggtgctgctgggtatcacgaaggcatcgttgtccaccgagtcgtttatctcg
gctgcttcgttccaggagacgacccgtgtgttgaccgaatcggcgatccgcggtgcggtg
gaccgtttgcacggcttgaaggaaaacgtgatcgtgggtcgtttgatcccggcgggttcc
ggttcggcgtatcaccaggagcgcaagcgcaagcgcaagctcttggaagaagtcgaggcc
gaagcggtatcgagtggcgtcgacatggtcgaagccgaggaagccctcaagcaagccttg
agcggcgaggactga
DBGET
integrated database retrieval system
