Methylogaea oryzae: MoryE10_18040
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Entry
MoryE10_18040 CDS
T07433
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
moz
Methylogaea oryzae
Pathway
moz02020
Two-component system
moz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
moz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MoryE10_18040 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MoryE10_18040 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
moz03021
]
MoryE10_18040 (rpoN)
Transcription machinery [BR:
moz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MoryE10_18040 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
ClpB_D2-small
DUF6415
Motif
Other DBs
NCBI-ProteinID:
BBL71198
UniProt:
A0A8D4VN12
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All DBs
Position
2057971..2059455
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AA seq
494 aa
AA seq
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MKQTLQLKLGQSLAMTPQLQQAIRLLQLSTLDLQQEIQEALDSNMMLEVDDEIETGGAQQ
GAEAQTAEPVRETPVEENYYQELAGSESQQNDIPNELAVDISWDDVYEAGASSGAPPSSG
DGEDYSFQRSAPQTLQDHLVWQMELTPFSDRDHAIAAAIIDAINDDGYLDTTVEDIHQGL
ADQLGDELELDEVQAVLHRIQQFDPPGVAAQDLADCLRIQLKQLAEDTPHRQLALEMVDK
HLDHLARKDFSRIKRLMRLEDDVFADVVALIRSLDPRPGRHVASEEPQYVIPDVFVVKRD
GGWQVAPNPETAPRLRVNPYYSSLIKRADDSAGNQSMRDHLQEARWFIKSLQSRNETLLK
VAKAIVERQQEFLEHGETAMKPLVLRDIAEAVSMHESTISRVTTQKYMHTPNGIFEFKYF
FSSHVSTDSGGEASATAIKALIKELVGQESPKKPLSDHKLAEMLVAKGINVARRTVAKYR
EALGIPPSNERKGF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaccttgcagctaaagctcgggcagtcgctggccatgacgccccaattgcag
caagccattcggctgctgcaactgtcgacgctcgatttgcaacaggaaatccaggaagcg
ctggattccaacatgatgctggaagtggacgacgagatcgaaacaggcggcgctcagcaa
ggcgccgaagcgcaaaccgcggaaccggtgcgggaaacgcccgtcgaagaaaattattac
caggagctggccgggtccgagtcgcagcaaaacgacatccccaacgagctggcggtggat
atttcctgggacgacgtctacgaagcgggcgcctcctccggcgcgccgccctcctccggg
gacggcgaggattacagcttccagcgcagcgcgccgcaaactttgcaggaccacctcgtg
tggcaaatggagttgaccccgttttccgaccgggaccacgccatcgccgccgcgatcatc
gacgccatcaacgacgacggctatttagacaccaccgtcgaggacatccatcaaggcctg
gccgaccaattgggggacgaactggagctggacgaagtgcaggcggtgctgcaccgtatc
cagcagttcgacccgcccggcgtggccgcacaggacctggccgactgcctgcgcattcag
ctgaagcaactggcggaagacacgccccaccggcaactggcgctggaaatggtggacaag
catctcgaccacctggcccgcaaggacttcagccgcatcaagcgcctcatgcgcctggaa
gacgacgtcttcgccgacgtggtagcgctgatccgctccctggatccccggcccggccgc
cacgtcgccagcgaagagccgcaatacgtcattcccgacgtattcgtcgtcaagcgggac
ggcggctggcaggtggcgcccaatccggaaaccgcgcccaggctgcgggtcaacccctat
tattccagcctcatcaagcgcgccgacgacagcgccggcaaccaaagcatgcgcgaccac
ctgcaggaagcgcgctggttcatcaagagcctgcagagccgcaacgaaaccctgctgaaa
gtcgccaaggccattgtcgaacggcagcaggaattcctggaacacggcgaaaccgccatg
aagcccttggtgctgcgggacatcgccgaagcggtgagcatgcatgaatcgaccatttcg
cgggtcaccacccagaaatacatgcacacgcccaacggcatcttcgaattcaaatacttt
ttctccagccacgtctccaccgacagcggcggagaagcgtccgccaccgccatcaaggcg
ctgatcaaggaattggtcggccaggaatcgccgaaaaagcccctcagcgaccataagctg
gcggaaatgctggtggccaagggcatcaatgtcgcccgccgcaccgtggccaagtaccgg
gaggccttgggcataccgccgtccaacgagcgcaagggcttttga
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