Methylogaea oryzae: MoryE10_19960
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Entry
MoryE10_19960 CDS
T07433
Symbol
deaD-1
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
moz
Methylogaea oryzae
Pathway
moz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MoryE10_19960 (deaD-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moz03019
]
MoryE10_19960 (deaD-1)
03009 Ribosome biogenesis [BR:
moz03009
]
MoryE10_19960 (deaD-1)
Enzymes [BR:
moz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MoryE10_19960 (deaD-1)
Messenger RNA biogenesis [BR:
moz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MoryE10_19960 (deaD-1)
Ribosome biogenesis [BR:
moz03009
]
Prokaryotic type
rRNA helicases
MoryE10_19960 (deaD-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BBL71390
UniProt:
A0A8D4VNZ0
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All DBs
Position
2345845..2347476
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AA seq
543 aa
AA seq
DB search
MQRAIQELGYEAPSPIQAKSIPCLLAGHDLLGQAQTGTGKTAAFALPLLQRIDVTQKRPQ
ALVLVPTRELAIQVAEAFQSYARHMEGFHVLPIYGGQSMDIQLRQLRRGVHVIVATPGRI
MDHMRRESLSLDNLGAVVLDEADEMLKMGFIDDVEWILEHTPDDRQVALFSATMPEAVRK
VAKRHLHNPEEIKIASKAATVDAIDQVYWYLSESQKLEALTRLLEVEDFDAMIIFVRTKT
ATVELAEKLEARGYSASPLNGDMNQQLRERTIDRLKKKALDVVVATDVAARGLDVERMSH
VVNYDIPYDTEAYIHRIGRTGRAGRKGKAILFVTNRERRLLGAIEKATRKPIKEMQLPSR
HAVAERRIEQFKQMLSTIVEDEDLAFFRDTVTDIAREQGLEVLDIAAALTWQAQRERPFI
VEDSVTAPPPKAPTREFRERDRDRDRDYGDADKKRKKKDKIREMDADSARYRIEVGREHG
VNPKDIVGAIANEGGIPGKRIGHIKLHDTYSFVDLPADLPAQTVKVLQKLWVRNRQLNLR
LVD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcgcgccattcaggaactcggttacgaggcgccctcccccatccaagcgaaaagt
attccctgcctattggccggccacgacctgctgggccaggcgcaaaccggcaccggcaaa
accgccgccttcgccctgccgctgctgcaacgcatcgacgtgacgcagaaacgcccgcaa
gccctggtgctggtgccgacccgcgagctggccatccaggtggccgaagcgttccaaagc
tacgcccgccacatggaaggcttccacgtgctgcccatttacggcggccagtccatggac
atccagctgcgccagctgcgccgcggcgtccacgtgatcgtcgcaacgccgggccgcatc
atggaccacatgcgccgcgaaagcttaagcctggacaacctgggcgcggtggtgttggac
gaagccgacgagatgttgaagatgggcttcatcgacgacgtggaatggatcctggaacac
accccggacgaccgccaggtggccctgttctccgccaccatgccggaagcggtgcgcaaa
gtggccaagcgccatttgcacaatccggaggaaatcaagatcgcctccaaagccgccacg
gtggacgccatcgaccaggtgtactggtatttgtccgaaagccagaagctggaagccctc
acccgcctgctggaggtggaggacttcgacgccatgatcatcttcgtgcgcaccaagacc
gccacggtggaattggcggaaaagctggaagcgcgcggctactccgcctcgcccctcaac
ggcgacatgaaccagcagttgcgcgagcgcaccatcgaccgcctgaagaaaaaggcgctg
gacgtggtggtggccaccgacgtggcggcccgcggcctggacgtggaacgcatgagccac
gtggtcaactacgacatcccctacgacaccgaagcctacatccaccgcatcggccgcacc
ggccgcgccggacgcaagggcaaagccatcctgttcgtcaccaaccgcgaacgccgcttg
ctgggcgccatcgaaaaagccacccgcaagcccatcaaggaaatgcagctgcccagccgc
cacgccgtggccgagcgccgcatcgagcagttcaagcagatgctgtccaccatcgtcgaa
gacgaggatctggcttttttccgcgacaccgtcaccgacatcgcccgcgaacaaggcctg
gaagtgctcgacatcgccgccgccctcacctggcaagcccaacgggaacgccccttcatc
gtcgaagacagcgttaccgcgccgccgccgaaagcgcccacgcgcgaattccgcgagcgg
gacagggatcgggaccgcgactacggcgatgccgacaaaaagcgtaagaaaaaggacaaa
atccgcgaaatggacgcggactccgcccgttaccgcatcgaagtgggccgcgagcacggc
gtgaaccccaaggacatcgtcggcgccatcgccaacgaaggcggcattcccggcaagcgc
atcggccacatcaagctgcacgacacctacagcttcgtggacctgccggccgacctgccg
gcgcagaccgtcaaggttctgcaaaagctgtgggtgcgcaaccggcagctgaacctgcgg
ctggtcgactaa
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