Methylogaea oryzae: MoryE10_31850
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Entry
MoryE10_31850 CDS
T07433
Symbol
alt
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
moz
Methylogaea oryzae
Pathway
moz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
moz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MoryE10_31850 (alt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
moz03021
]
MoryE10_31850 (alt)
Transcription machinery [BR:
moz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MoryE10_31850 (alt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BBL72579
UniProt:
A0A8D4VSN6
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All DBs
Position
complement(3667509..3669314)
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AA seq
601 aa
AA seq
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MDHEQQQAQLKELIAKGKSQGYLTYAEVNDHLPSHIVDPDQMEDIIGMINDMGIEVHEVA
PDTDMITDAAVVVGDDDDAAEVAAALASVDSEHGRTTDPVRMYMREMGTVELLTREGELT
IAKRIEQGLLQASTELARFPAVMDYFIKAFDRVNEGETRLSDLISDFVDPMQDEVLPEEV
LAVDDDSETSDIAEADTGPDPELVKEKIEELKKRHKAVISSLNKNGYKHAKTDKAFAAVT
DAFLEFKRTPQFLKELTDVLRGVMGKIREQERIIQDIAVNRCRMPRKDFLSAFQGNETNP
EWLDAQLASGKAYAEKLSGYADDIRRAHARLAAIEKENYLAISEIRDIYRRMLVAEEMAR
KAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATW
WIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREATPEELSVRMEMPEDK
VRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSRIMSPVEAATVSGLRETTQQVLAGLTS
REAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSFLDV
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgaacagcaacaagcccagctgaaagagctcattgccaagggcaagtcgcaa
ggctatctgacatatgccgaggtcaacgaccatttgcccagccacattgtggacccggat
caaatggaagacatcatcggcatgatcaacgacatgggcatcgaagtccatgaagttgcg
ccggatacggacatgattaccgacgccgccgtcgtggtcggcgacgacgacgacgccgcg
gaagtggcagccgcgctggcctcggtggattccgagcacggccgcaccaccgacccggtg
cgcatgtacatgcgcgaaatgggcacggtcgaactgcttacccgcgaaggcgagttgacc
atcgccaagcgcatcgagcaaggcttgctgcaagcctccacggaattggcgcgcttcccc
gccgtgatggactacttcatcaaggcgttcgatcgcgtcaacgaaggcgaaacccgcttg
tcggatttgatttccgatttcgtcgacccgatgcaggacgaagtgctgcctgaagaagtg
ttggcggtcgatgacgattcggaaacttcggatattgcggaggccgataccggtccggat
ccggagttggtgaaagaaaaaatcgaggaacttaagaagcgccacaaggcggtgatctcc
tccctcaacaagaacggttacaagcacgccaagaccgacaaggcttttgccgccgttacc
gacgcgttccttgagttcaagcgtacgccgcagttcctgaaggaactgaccgacgtgctg
cgcggggttatgggcaaaatccgcgagcaggaaaggatcattcaggatatcgccgtcaac
cgctgccggatgccgcgcaaggacttcctcagcgccttccaaggcaacgaaaccaacccc
gagtggttggacgcgcagttggccagcggcaaggcctatgcggaaaaactgagcggttac
gccgacgacattcgccgcgcccatgcccgcttggccgccatcgaaaaagagaactatctg
gccatcagcgaaatccgcgatatttaccgccgcatgctggtggcggaggaaatggcgcgc
aaggccaagaaggaaatgatcgaggccaacctgcgtctggtgatttccatcgccaagaaa
tatactaatcgcggcctgcaattcctggacttgatccaggaaggcaacatcggtttaatg
aaagcggtggacaagttcgaataccgccgcggctacaagttctccacctatgcgacatgg
tggatacgacaagccatcacccggtccattgccgaccaggcgcgcacgattcgcatcccg
gtgcacatgatcgaaaccatcaacaagctcaaccggatatcccggcagatgctgcaggag
atgggtcgtgaagccacgccggaagagctgtcggtgcgcatggaaatgcccgaggacaaa
gtccgcaaggtgctgaagatcgccaaggagcccatttccatggaaactcccattggcgat
gacgaagattcgcatctgggcgatttcatcgaagactcccggatcatgtcgcccgtcgaa
gcggccaccgtgtccggcctgcgggaaaccacccagcaggtattggccggcttgacttcg
cgtgaggccaaggtgctgcgcatgcgcttcggcatcgacatgaacacggaccacaccttg
gaagaggtgggcaagcaattcgacgtgacgcgcgagcgcattcgccagatcgaagcgaaa
gccctgcgcaaactgcgccacccgtcgcgctcggaacagctgcgcagcttcctggatgtg
gattaa
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