Mycobacterium avium subsp. paratuberculosis K-10: MAP_0799c
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Entry
MAP_0799c CDS
T00156
Name
(GenBank) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mpa
Mycobacterium avium subsp. paratuberculosis K-10
Pathway
mpa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MAP_0799c
09124 Replication and repair
03420 Nucleotide excision repair
MAP_0799c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpa03021
]
MAP_0799c
03400 DNA repair and recombination proteins [BR:
mpa03400
]
MAP_0799c
Enzymes [BR:
mpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MAP_0799c
Transcription machinery [BR:
mpa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MAP_0799c
DNA repair and recombination proteins [BR:
mpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MAP_0799c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Cox20
Motif
Other DBs
NCBI-ProteinID:
AAS03116
UniProt:
Q742N6
LinkDB
All DBs
Position
complement(819041..820690)
Genome browser
AA seq
549 aa
AA seq
DB search
MSDGPLIVQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVVVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPISLTEDGW
QLRDYQQMAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRE
LVARTSLTEDEIGEYSGERKEIRPVTISTYQMITRRTRGEYRHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSKRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTDNERMMYATAEPEERYRLCSTVHTKIAVVKSILDKHPGEQTLVIGAYLD
QLDELGEQLGAPVIQGSTRTKEREELFDAFRRGEVNTLVVSKVANFSIDLPEAAVAVQVS
GTFGSRQEEAQRLGRLLRPKSDGGGAVFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggaccgttgatcgtgcagtcggacaagacggtactgctcgaagtggaccac
gaactcgccggcgcggcgcgggccgccatcgcgccgttcgccgagctggaacgcgcaccc
gagcacgtgcacacctaccggatcaccccgctggcgctgtggaacgcgcgggccgccggc
cacgacgccgaacaggtggtcgacgcgctggtcagcttctcccgctacgcggtgccccag
ccgctgctggtcgacatcgtcgacaccatggcccgctacggccggctgcagctggtgaag
aaccccgcgcacggcctgaccctggtgagcctggaccgcgcggtgctcgaggaggtgctg
cgcaacaagaagatcgccccgatgctcggcgcccgcatcgacgacgacaccgtcgtcgtg
catcccagcgaacgcggccgcgtcaagcagatgctgctcaaaatcggttggcccgcagag
gatctcgcgggctacgtcgacggcgaggcgcatccgatcagcctgaccgaggacggctgg
cagctgcgcgactaccagcagatggccgccgactcgttctggtccggcggctccggggtg
gtggtgctgccctgcggcgccggcaagacgctggtcggggcggcggcgatggccaaagcc
ggcgcgacgacgctgatcctggtgaccaacatcgtcgcggcgcggcaatggaagcgcgag
ctggtggcccgcacctcgctgaccgaggacgagatcggcgaatactcgggcgagcgcaag
gagattcgcccggtcaccatctcgacctaccagatgatcacccgccgcaccaggggcgag
taccggcatctggagctgttcgacagccgcgactggggcctgatcatctacgacgaggtg
cacctgttgccggcgccggtgttccggatgaccgccgatctgcagtccaagcggcgcctg
gggctgaccgccaccctggtccgcgaggacggccgggagggcgacgtgttctccctgatc
gggccgaagcgttacgacgcgccgtggaaggacatcgaggcgcagggctggatcgcgccg
gccgaatgcgtcgaggtgcgggtcaccatgaccgacaacgagcggatgatgtacgccacc
gccgaacccgaggagcgctaccggctgtgctcgacggtgcacacgaaaatcgctgtggtg
aaatcgatcctggacaagcatccgggtgaacagaccctggtgatcggcgcgtacctcgat
cagctcgacgagctcggtgagcagctgggcgccccggtgatccagggatccacccggacc
aaggaacgcgaagagctcttcgacgcctttcgccgcggcgaggtgaacaccctggtggtg
tccaaggtcgccaacttctccatcgacctgccggaagccgctgtggcggtgcaggtttcc
ggcaccttcgggtcacgccaggaggaggcgcagcggctgggccggctgttgcggcccaag
tccgacggcggcggcgccgtcttctattcggtggtggcgcgcgacagcctggacgccgag
tacgccgcgcaccggcagcgcttcctggccgagcagggctacggctacatcatccgcgac
gccgacgacctgctgggcccggcgatttaa
DBGET
integrated database retrieval system
