KEGG   Mycobacterium avium subsp. paratuberculosis K-10: MAP_1124
Entry
MAP_1124          CDS       T00156                                 
Name
(GenBank) hypothetical protein
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
mpa  Mycobacterium avium subsp. paratuberculosis K-10
Pathway
mpa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mpa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MAP_1124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpa03021]
    MAP_1124
   03400 DNA repair and recombination proteins [BR:mpa03400]
    MAP_1124
Enzymes [BR:mpa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MAP_1124
Transcription machinery [BR:mpa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MAP_1124
DNA repair and recombination proteins [BR:mpa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MAP_1124
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AAS03441
UniProt: Q741G7
LinkDB
Position
1177356..1177682
AA seq 108 aa
MTNSQSDAALAAVLDRFDPSAGGPGAYDTPLGITNPPIDELLDRVSSKYALVIYAAKRAR
QINDYYNQLGEGILEYVGPLVEPGLQEKPLSIALREIHGDLLEHTEGE
NT seq 327 nt   +upstreamnt  +downstreamnt
gtgactaactcgcagtccgacgcggcgctggccgccgtcctcgaccggttcgatccgtcc
gccgggggcccgggcgcctacgacaccccgctgggcatcaccaacccgcccatcgacgag
ctgctggaccgcgtctcgagcaagtacgcgctggtcatctacgcggccaagcgggcccgc
cagatcaacgactactacaaccagctcggcgagggcatcctcgaatacgtgggcccgctg
gtcgagccggggctgcaggagaaaccgctttcgatcgcgctgcgcgagatccacggcgac
ctgctcgagcacaccgagggcgagtaa

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