Mycobacterium avium subsp. paratuberculosis K-10: MAP_1328c
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Entry
MAP_1328c CDS
T00156
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mpa
Mycobacterium avium subsp. paratuberculosis K-10
Pathway
mpa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MAP_1328c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpa03400
]
MAP_1328c
Enzymes [BR:
mpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MAP_1328c
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MAP_1328c
DNA repair and recombination proteins [BR:
mpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MAP_1328c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AAS03645
UniProt:
Q740M2
LinkDB
All DBs
Position
complement(1420827..1421615)
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AA seq
262 aa
AA seq
DB search
MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW
LVLPTDGPTLLIHSGMTGRPYYCADGAAEDRHQRLVVSLDQGELRYTDLRKLRGVWLADD
PDDLVPITGRQGPDALGLGLRDFRDALTARSARRRQLKSALMDQSVLAGLGNLLVDEICW
RARIRPTRAVADLDDDEVKALHRAMTQVLRTAVRHGRVPGLPRWLTGARDAPDPHCPRCG
GRLDHARVGGRTTLWCPRCQPG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgacgtggagggattccggcggcaactggccgacgcgttgccgggg
cgacgcgtccggcgggtgaaggtgcacgatcccgggatcctgcgcaacaccaccgcgacg
acgctggcccgccggctgaccgggcggcggttcgccggcccgcgacgacacggcaagtgg
ctggtgcttcccaccgacggcccgacgctgctgatccacagcggaatgaccggccgcccc
tactattgcgccgacggtgccgccgaggaccgccaccagcgcctcgtggtgtcgctggac
cagggcgaactgcgctacaccgatcttcgtaaattgcggggagtctggctggccgacgat
cccgacgatctggtgcccatcaccggccggcaaggccccgacgcgctgggtcttggcctg
cgcgatttccgcgacgcgctgacggcgcgctcggcccggaggcggcagctcaaatccgcg
ctgatggaccagtcggtgctcgccgggctgggcaacctgctggtcgacgagatctgctgg
cgggcccggatccgccccacccgcgcggtcgcggacctggacgacgacgaggtgaaggcg
ctgcaccgggcgatgacgcaggtgctgcgcaccgcggtgcggcatggccgggtgccgggc
ttgccgcgctggctcaccggcgcccgcgacgcgcccgacccgcactgcccccgctgcggc
ggccgcctggaccacgcccgggtgggcggccggaccaccctgtggtgcccgcgctgtcag
cccgggtaa
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