Mycobacterium avium subsp. paratuberculosis K-10: MAP_1474c
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Entry
MAP_1474c CDS
T00156
Symbol
sigF
Name
(GenBank) SigF_1
KO
K03090
RNA polymerase sigma-B factor
Organism
mpa
Mycobacterium avium subsp. paratuberculosis K-10
Brite
KEGG Orthology (KO) [BR:
mpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpa03021
]
MAP_1474c (sigF)
Transcription machinery [BR:
mpa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MAP_1474c (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_3
HTH_23
HTH_Crp_2
MarR
HTH_24
DUF134
Sigma70_ECF
MarR_2
KORA
HTH_31
DUF7343
GerE
HTH_Tnp_4
DUF1492
HTH_7
LacI
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AAS03791
UniProt:
Q73ZX7
LinkDB
All DBs
Position
complement(1613298..1614107)
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AA seq
269 aa
AA seq
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MTNAIAPTPTAARPTSQSDDSYEDVVEMFLELRRMPAESHEYRRQRERIVARCLPLADHV
ASHFARRGEGLDDLVQVARLGLMNAVNRFDPAKGPSFIGFAVPTMMGEVRRYFRDYSWGM
RVPRRLRELHVQISRTTADLAQQLGRAPNAGELSQVLEVPREEIVECLVAGDAYRLDSLD
APQGADSSGTPRSVADSVGDIDPQIEHITNREALRVLVATLPHREREVLRMRFFESMTQS
QIAERIGVSQMQVSRILANTLRCLRDQLE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcaatcgctccgacacctacagctgcccggcccaccagccaatccgacgat
tcgtacgaagacgtcgtcgagatgttcctggaactgcgccggatgcccgcggaatcgcac
gagtatcgccgtcagcgtgagcgcatcgtggcccgatgcctgcccctggccgatcacgtg
gccagccatttcgcccgccgcggcgagggtctcgacgacttggtccaggtcgcgcggctg
gggctgatgaacgccgtcaaccgcttcgatccggcgaagggtcccagcttcatcgggttc
gccgtgcccaccatgatgggcgaggtccgccgctatttccgtgactacagctgggggatg
cgggtgccgcggcggctgcgcgagttgcacgtgcagatcagcaggacgaccgccgacctc
gcccagcagctcggccgggcgccgaacgccggcgagctgtcgcaggtgctcgaggttccg
cgggaagagatcgtcgaatgcctggtcgccggcgacgcctatcgcctcgactcgttggat
gcgccgcagggtgcggacagttccgggacgccgcgctcggtggccgactcggtgggcgac
atcgacccgcagatcgagcacatcaccaaccgggaagcgctgcgggtcctggttgccacc
ctgccgcaccgcgaacgcgaggtgttgcggatgcggttcttcgaatccatgacgcagagc
cagatagccgagcggatcggcgtctcgcagatgcaggtctcgcgcatcctggcaaacacc
ctgcgctgcctgcgcgaccaactcgagtaa
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