Mycobacterium avium subsp. paratuberculosis K-10: MAP_1828c
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Entry
MAP_1828c CDS
T00156
Symbol
helY
Name
(GenBank) HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mpa
Mycobacterium avium subsp. paratuberculosis K-10
Brite
KEGG Orthology (KO) [BR:
mpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpa03019
]
MAP_1828c (helY)
Enzymes [BR:
mpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MAP_1828c (helY)
Messenger RNA biogenesis [BR:
mpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MAP_1828c (helY)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_HelY
DEAD
DSHCT
ResIII
Helicase_C
DEXQc_Suv3
HVO_A0261_N
MTR4-like_stalk
AAA_22
WHD_AprA
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AAS04145
UniProt:
Q73YX5
LinkDB
All DBs
Position
complement(2006287..2008752)
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AA seq
821 aa
AA seq
DB search
MSPDPSAPDAATELVELTRFSSELPFALDGFQRRACAALERGHGVLVCAPTGAGKTVVGE
FAVHLALAAGGKCFYTTPLKALSNQKHTDLTARYGRDRIGLLTGDMSVNADAPVVVMTTE
VLRNMLYADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILHLPDEVRVVSLSATVSNAE
EFGGWIQTVRGDTTVVVDEHRPVPLWQHVLVGKRLFDLFDYRNAEAPGQPGAGREPRVNP
DLLRHIAHRREADRLSDWQPRRGAGRGRPPARAGRPRFYRTPGRPDVIATLDAEGLLPAI
TFVFSRAGCDAAVQQCLRSPLQLTTQEERVQIAEVIEHRCGDLADADLAVLGYYEWREGL
LRGLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKFNGEQ
HVALTPGEYTQLTGRAGRRGIDVEGHAVVLWNPTEETTEPSAVAGLASTRTFPLRSSFAP
SYNMTINLVQQMGPEQAHRLLEQSFAQYQADRSVVGLVRGIERGQAMLDEIAAELGGPKA
PILEYARMRARISEMERAQTRASRLHRRQAASDALAALRRGDIINIAHGRRGGLAVVLES
ARDSSDPRPLVLTENRWAGRISSADYSGNSAPVGSMPLPKRVEHRQPRVRRDLASALRSA
AAGLSIPAKRRRGDSDEGFHDPELASLREQLRRHPSHHTPGLEAQVRQAERYLRIERDNA
QLEKKVATATNSLARTFDRIVGLLTERGFIERRDGDPRVTDDGRLLARIYSESDLLVAEC
LRTGAWSGLKPAELAAVVSSVLYESRGGEGPGTAFAAEAPT
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgacccgtcggcacccgacgccgcgaccgaactggtcgagctcacccggttc
agctccgaactgccctttgcgctcgacggctttcagcggcgggcctgcgcggcgctggaa
cgcggacacggcgtgctggtctgcgcgccgaccggggccggcaagaccgtggtcggcgaa
ttcgcggtgcacctggccctggcggccggcggcaaatgcttctacaccacgccgctgaag
gcgctgagcaaccagaagcacaccgatctgaccgcccgctacggccgcgaccgcatcggc
ctgctcaccggggacatgtcggtgaacgcggatgcgcccgtcgtggtgatgaccaccgag
gtgctacgcaacatgctgtacgcggattcacctgcgctgcaagggctttcgtatgtggtg
atggacgaggtgcatttcctggccgaccggatgcggggcccggtgtgggaggaggtcatc
ctgcacctgcccgacgaggtgcgggtggtcagcctgtcggcgacggtcagcaacgccgag
gagttcggcggctggatccagaccgtgcgcggtgacaccacggtggtggtcgacgagcac
cggccggtgccgctgtggcagcacgtgctggtgggcaagcgactgttcgacctgttcgac
taccgcaacgccgaagcacccgggcagccgggcgcgggccgcgagccgcgggtcaacccg
gatctgttgcgccacatcgcgcatcgccgcgaagccgatcggctctcggattggcaaccg
cgccgcggcgccggacgcggccgtccacccgcccgggccggacggccgcgcttctaccgg
accccggggcgcccggacgtgatcgccaccctggacgccgaggggctgctgccggcgatc
accttcgtgttctcccgggccggttgtgacgccgccgtccagcaatgcctgcgttcgccg
ctgcagctgaccactcaggaggagcgggtccagatcgccgaggtgatcgagcaccggtgc
ggcgatctcgccgacgccgacctggcggtgctcggctactacgagtggcgcgaggggctg
ctgcgtggtttggccgcccaccacgccggcatgctgcccgccttccggcacacggtcgag
gagttgttcaccgcgggcctggtcaaggcggtgttcgccaccgagacgctggcgctcggc
atcaacatgccggcccgcacggtggtgctcgaacggctggtcaagttcaacggcgagcag
cacgtggcgctgacaccgggggagtacacccagttgaccggccgcgccgggcggcgcggc
atcgatgtcgagggccacgcggtggtgctgtggaatcccaccgaggaaaccaccgagccg
tccgcggtggccgggctggcctccacccgcaccttcccgctgcgcagctcgttcgccccg
tcctacaacatgacgatcaacctggtccagcagatgggccccgagcaggcacatcggctg
ctggagcagtcgttcgcgcagtaccaggccgaccgctcggtggtcggcctggtgcggggc
atcgagcggggccaggcgatgctcgacgagatcgccgccgagctgggtgggcccaaggcg
ccgattctggagtacgcgcggatgcgggcccggatctcggagatggaacgcgcgcaaacc
cgtgcgtcgcggctgcaccgacggcaggcggccagcgatgcgctggccgcgctgcgccgc
ggcgacatcatcaacatcgcccacggccgccgcggcgggctggcggtggtcctggaatcg
gcccgcgacagctccgatccgcggccgttggtgctgaccgaaaaccgttgggctggacgg
atttcctcggccgactattcgggcaactcggcaccggtcggttcgatgccgttgccgaag
cgggtcgagcaccgccaaccgcgggtccggcgtgacctggcgtcggcgctgcggtcggcg
gccgccgggctgagcattccggccaagcgtcgccgcggggactccgacgaggggttccac
gacccggagctggcgtcgctgcgcgaacagctgcgccggcatccgtcgcaccacacgccg
ggcctcgaggcgcaggtccggcaggccgagcgttacctgcggatcgaacgcgacaacgcg
caactggagaaaaaggttgccacggctaccaattcgctggcccggaccttcgaccggatc
gtcgggctgctcaccgagcgtggcttcatcgaacgccgcgacggcgatccccgggtcacc
gacgacggccggttgctggcccgcatctacagcgagagcgacctgctggtcgccgaatgc
ctgcgcaccggcgcctggtcggggctgaagccggccgagctggcggcggtcgtgtcgtcg
gtgctctacgagagccggggcggcgagggcccgggtaccgcgttcgcggccgaggcgccg
acgtag
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