Mycobacterium avium subsp. paratuberculosis K-10: MAP_2464c
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Entry
MAP_2464c CDS
T00156
Symbol
rho
Name
(GenBank) Rho
KO
K03628
transcription termination factor Rho
Organism
mpa
Mycobacterium avium subsp. paratuberculosis K-10
Pathway
mpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAP_2464c (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpa03021
]
MAP_2464c (rho)
03019 Messenger RNA biogenesis [BR:
mpa03019
]
MAP_2464c (rho)
Transcription machinery [BR:
mpa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MAP_2464c (rho)
Messenger RNA biogenesis [BR:
mpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MAP_2464c (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
VWA_2
AAA_22
DUF7440
Motif
Other DBs
NCBI-ProteinID:
AAS04781
UniProt:
Q73X46
LinkDB
All DBs
Position
complement(2768110..2769972)
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AA seq
620 aa
AA seq
DB search
MTDTDLFTAGENTDANQLSTAVTTDTPDAKTHAPVGALTTMVLPELRALANQVGVKGTSG
MRKNELIAAIKEVRGQANGAAPAEQANGAEPAEDSGKPDAKDAKDDTTPDTKDANDHTGA
QSAAEAPAPSEQNGATAEAPRRERRSASRDAGAAGRGSDDADRETDGREQSKQDSREQSK
QDGGDQDQQSSGGQQGRGSNQQDDDGEGRQGRRGRRFRDRRRRGERSGEGGDAELREDDV
VQPVAGILDVLDNYAFVRTSGYLAGPHDVYVSMNMVRKNGLRRGDAVTGAVRVPKDGEQP
NQRQKFNPLVRLDSVNGGSVEDAKKRPEFGKLTPLYPNQRLRLETTPDRLTTRVIDLIMP
IGKGQRALIVSPPKAGKTTILQDIANAITKNNPECHLMVVLVDERPEEVTDMQRSVKGEV
IASTFDRPPSDHTSVAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSG
GVDSTALYPPKRFLGAARNIEEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDR
KIAERRVFPAVDVNPSGTRKDELLLSPDEFGIVHKLRRVLSGLDSHQAIDLLMSQLRKTK
NNYEFLVQVSKTTPGAMDND
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctgttcacggctggcgaaaacactgacgccaatcaactctctact
gccgtgaccacagacaccccagacgcgaagacgcatgcgccggtcggtgccctgaccacc
atggtgctgcccgagctgcgcgcgctggctaaccaggtcggcgtcaaggggacgtcgggc
atgcgtaagaacgaactgatcgccgcgatcaaggaagtccgggggcaggccaacggcgcc
gcgcccgctgagcaggccaacggcgccgagccggccgaggacagcggcaagcccgacgcc
aaggacgccaaggacgacaccacgcccgacaccaaggacgccaacgaccacaccggcgct
caaagcgccgccgaggcgccggccccgagcgagcagaacggcgccaccgccgaggcgccg
cgccgcgagcgacgcagcgcgtcccgcgacgcgggagcggccggccggggcagcgacgac
gccgaccgcgagaccgacggccgcgagcaaagcaagcaggacagccgcgagcaaagcaag
caggacggcggcgaccaggaccagcagagctccggtggccagcaggggcgcggctccaac
cagcaggacgacgacggcgagggacgtcagggccggcggggacgccgcttccgtgaccgc
cggcgccgcggcgaacggtccggcgagggcggcgacgccgaactgcgcgaggacgacgtc
gtccagccggtggccggcattctcgacgtgctcgacaactacgccttcgtgcgcacctcc
ggctacctggccggcccgcacgacgtctacgtgtcgatgaacatggtgcgcaagaacggc
cttcgccgcggtgacgcggtgaccggtgcggtccgggtgcccaaggacggcgagcagccc
aaccagcggcagaagttcaacccgttggtgcgcctggacagtgtcaacggcggctccgtc
gaggacgccaagaagcgtcccgaattcggcaagctgacgccgctgtaccccaaccagcgg
ctgcgcctggagaccacgccggaccggctgaccacccgggtcatcgacctgatcatgccg
atcggcaagggccagcgcgcgctgatcgtgtcgccgcccaaggcgggtaagacgaccatc
ctgcaggacatcgccaacgcgatcaccaagaacaacccggaatgccacctcatggtcgtg
ctcgtcgacgagcggcccgaggaggtcaccgacatgcagcgctcggtcaagggcgaggtc
atcgcctcgacgttcgaccggccgccgtccgaccacacctcggtcgccgagctggccatc
gagcgcgccaagcgcctcgtcgagcagggcaaggacgtcgtcgtgctgctggactcgatc
acccggctgggccgcgcctacaacaacgcgtcgcccgcctcgggccgcatcctgtccggt
ggtgtggactccaccgcgctctacccgcccaagcggttcctgggcgccgcccgcaacatc
gaggaaggcggctcgctgaccatcatcgccaccgccatggtcgagaccggatccaccggt
gacaccgtcatcttcgaggagttcaagggcaccggtaacgccgagctcaagctggaccgc
aagatcgccgagcggcgggtcttcccggcggtcgacgttaacccctcgggtacccgcaag
gacgagctgctgctgtcgccggacgagttcggcatcgtgcacaagctgcgccgggtgctg
tccggcctggattcgcaccaggccatcgacctgctgatgagccagctgcgcaagaccaag
aacaactacgagttcctggtccaggtgtccaagaccacgcccggggcgatggacaacgac
tag
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