Mycobacterium avium subsp. paratuberculosis K-10: MAP_3024c
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Entry
MAP_3024c CDS
T00156
Symbol
hupB
Name
(GenBank) HupB
KO
K03530
DNA-binding protein HU-beta
Organism
mpa
Mycobacterium avium subsp. paratuberculosis K-10
Brite
KEGG Orthology (KO) [BR:
mpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpa03032
]
MAP_3024c (hupB)
03036 Chromosome and associated proteins [BR:
mpa03036
]
MAP_3024c (hupB)
03400 DNA repair and recombination proteins [BR:
mpa03400
]
MAP_3024c (hupB)
DNA replication proteins [BR:
mpa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MAP_3024c (hupB)
Chromosome and associated proteins [BR:
mpa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MAP_3024c (hupB)
DNA repair and recombination proteins [BR:
mpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MAP_3024c (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Extensin_1
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AAS05572
UniProt:
Q73VI9
LinkDB
All DBs
Position
complement(3364374..3365012)
Genome browser
AA seq
212 aa
AA seq
DB search
MNKAELIDVLTQKLNTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPSEGPAVKRGVVGGAAKKTAAKKAP
AKKAAAKKAPAKKAAAKKAPAKKAAVKKAPARKAATKAPVRKAATKAPAKKVAAKKAPAK
KAATKAPAKKAASKAPARKAAAKKTTARRGRK
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcattgatgtgctcacacagaaattgaacacggaccgtcggcag
gcgaccgcagcggtcgagaatgtcgtcgacaccattgtgcgtgcggtacacaagggcgac
agcgtcacgatcaccgggttcggtgtattcgaacagcggcggcgcgccgcacgggtggcc
cgcaacccgcgtaccggtgagacggtgaaggtgaagccgacgtccgtcccggcgttccgc
cccggcgctcaattcaaagcggttgtctctggcgcacagcgtctcccgtccgagggcccg
gccgtcaagcgcggcgtggtcggcggcgcggccaagaagaccgccgccaagaaggcgccc
gccaagaaggctgcggcgaagaaggctccggccaagaaggccgccgccaagaaggccccg
gcgaagaaggctgcggtcaagaaggctccggcccgcaaggccgcgaccaaggctccggtg
cgcaaggccgcgaccaaggctccggccaagaaggttgcggcgaagaaggctccggccaag
aaggccgcgaccaaggctccggccaagaaggccgccagcaaggctccggctcgcaaggcc
gcggccaagaagacgaccgcgcgtcgcggccgcaagtag
DBGET
integrated database retrieval system
