Mycobacterium paraterrae: MKK62_04565
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Entry
MKK62_04565 CDS
T08203
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mpaa
Mycobacterium paraterrae
Pathway
mpaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MKK62_04565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpaa03400
]
MKK62_04565
Enzymes [BR:
mpaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MKK62_04565
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MKK62_04565
DNA repair and recombination proteins [BR:
mpaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MKK62_04565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
DUF8106
NFACT_N
DUF6441
TMEM106_N
DUF7577
DUF2752
Motif
Other DBs
NCBI-ProteinID:
UMB72114
UniProt:
A0ABY3VVM7
LinkDB
All DBs
Position
complement(803319..803792)
Genome browser
AA seq
157 aa
AA seq
DB search
MKVPGIAALGPDALSLSLDDLTKLLAGNTGRIKSVITDQKVIAGIGNAYSDEILHVAKLS
PFATAGKLNEAQLAALHDSMISVLSDAVSRSVGQQAATLKGEKRSGMRVHARTGLPCPVC
GDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
ctgaaagtccccggcatcgcagcgctaggcccggacgccttatcgctcagcctcgacgac
ctcaccaagctgctcgccggaaacaccggtcggatcaaatccgtcatcaccgaccaaaag
gtgatcgccggcatcggcaacgcctacagcgacgagatcctgcacgtcgcgaagctgtcg
ccgttcgcgacggccggcaagctcaacgaggctcagctggcggcgttgcacgattcgatg
atctccgttctctccgatgccgtgtcgaggtcggtcggccagcaggccgcgaccctcaag
ggggagaagcgatccggcatgcgggtgcatgcccggaccggcctgccgtgcccggtgtgc
ggcgacacggtccgcgaagtgtcgttcgccgacaagtcttttcagtactgcccgacgtgc
cagaccggcggcaaggtgctggccgaccggcggatgtcgcgtctgctgaaatag
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